BEARR: Batch Extraction and Analysis of cis-Regulatory Regions. - Vinsensius B. Vega; Dhinoth Kumar Bangarusamy; Lance D. Miller; Edison T. Liu; Chin-Yo Lin (Nucleic Acids Res., 2004)

Multimodality as a Criterion for Feature Selection in Unsupervised Analysis of Gene Expression Data. - Yi Li; Wing-Kin Sung; Lance D. Miller (BIBE, 2005)

Correlation test to assess low-level processing of high-density oligonucleotide microarray data. - Alexander Ploner; Lance D. Miller; Per Hall; Jonas Bergh; Yudi Pawitan (BMC Bioinform., 2005)

Differential Friendly Neighbors Algorithm for Differential Relationships Based Gene Selection and Classification using Microarray Data. - Karuturi R. Krishna Murthy; Silvia Wong; Wing-Kin Sung; Lance D. Miller (DMIN, 2006)

Identifying gene expression changes in breast cancer that distinguish early and late relapse among uncured patients. - Philippe Broët; Vladimir A. Kuznetsov; Jonas Bergh; Edison T. Liu; Lance D. Miller (Bioinform., 2006)

Weighted Top Score Pair Method for Gene Selection and Classification. - Huaien Luo; Yuliansa Sudibyo; Lance D. Miller; Karuturi R. Krishna Murthy (PRIB, 2008)

LOMA: A fast method to generate efficient tagged-random primers despite amplification bias of random PCR on pathogens. - Wah-Heng Lee; Christopher W. Wong; Wan Yee Leong; Lance D. Miller; Wing-Kin Sung (BMC Bioinform., 2008)

scLM: Automatic Detection of Consensus Gene Clusters Across Multiple Single-cell Datasets. - Qianqian Song; Jing Su 003; Lance D. Miller; Wei Zhang (Genom. Proteom. Bioinform., 2021)

hDirect-MAP: projection-free single-cell modeling of response to checkpoint immunotherapy. - Yong Lu; Gang Xue; Ningbo Zheng; Kun Han; Wenzhong Yang; Rui-Sheng Wang; Ling-Yun Wu; Lance D. Miller; Timothy Pardee; Pierre L. Triozzi; Hui-Wen Lo; Kounosuke Watabe; et al. (Briefings Bioinform., 2022)