Accurate, Fast and Lightweight Clustering of de novo Transcriptomes using Fragment Equivalence Classes. - Avi Srivastava; Hirak Sarkar; Laraib Malik; Rob Patro (CoRR, 2016)

Rich Chromatin Structure Prediction from Hi-C Data. - Laraib Malik; Rob Patro (BCB, 2017)

Towards Selective-Alignment: Bridging the Accuracy Gap between Alignment-Based and Alignment-Free Transcript Quantification. - Hirak Sarkar; Mohsen Zakeri; Laraib Malik; Rob Patro (BCB, 2018)

Grouper: graph-based clustering and annotation for improved de novo transcriptome analysis. - Laraib Malik; Fatemeh Almodaresi; Rob Patro (Bioinform., 2018)

An Image-based Human Physical Activities Recognition in an Indoor Environment. - Farman Ullah; Asif Iqbal 008; Ajmal Khan; Rida Gul Khan; Laraib Malik; Kyung Sup Kwak (ICTC, 2020)

A Bayesian framework for inter-cellular information sharing improves dscRNA-seq quantification. - Avi Srivastava; Laraib Malik; Hirak Sarkar; Rob Patro (Bioinform., 2020)