EASE: Evolutional Authoring Support Environment. - Lora Aroyo; Akiko Inaba; Larisa N. Soldatova; Riichiro Mizoguchi (Intelligent Tutoring Systems, 2004)

An ontology for a Robot Scientist. - Larisa N. Soldatova; Amanda Clare; Andrew Sparkes; Ross D. King (ISMB (Supplement of Bioinformatics), 2006)

Formalising Phylogenetic Experiments: Ontologies and Logical Inference. - Ross D. King; Larisa N. Soldatova (AAAI Spring Symposium: Symbiotic Relationships between Semantic Web and Knowledge Engineering, 2008)

OntoDM: An Ontology of Data Mining. - Pance Panov; Saso Dzeroski; Larisa N. Soldatova (ICDM Workshops, 2008)

The EXACT description of biomedical protocols. - Larisa N. Soldatova; Wayne Aubrey; Ross D. King; Amanda Clare (ISMB, 2008)

An Ontology-Based Test Generation System. - Larisa N. Soldatova; Riichiro Mizoguchi (Semantic Web Technologies for e-Learning, 2009)

Semantic Annotation of Papers: Interface & Enrichment Tool (SAPIENT). - Maria Liakata; Claire Q; Larisa N. Soldatova (BioNLP@HLT-NAACL, 2009)

Towards an Ontology of Data Mining Investigations. - Pance Panov; Larisa N. Soldatova; Saso Dzeroski (Discovery Science, 2009)

The Robot Scientist Adam. - Ross D. King; Jem J. Rowland; Wayne Aubrey; Maria Liakata; Magdalena Markham; Larisa N. Soldatova; Ken E. Whelan; Amanda Clare; Mike Young; Andrew Sparkes; Stephen G. Oliver; Pinar Pir (Computer, 2009)

Representing Entities in the OntoDM Data Mining Ontology. - Pance Panov; Saso Dzeroski; Larisa N. Soldatova (Inductive Databases and Constraint-Based Data Mining, 2010)

Modeling biomedical experimental processes with OBI. - Ryan Remy Brinkman; Mélanie Courtot; Dirk Derom; Jennifer Fostel; Yongqun He; Phillip W. Lord; James Malone; Helen E. Parkinson; Björn Peters; Philippe Rocca-Serra; Alan Ruttenberg; Susanna-Assunta Sansone; et al. (J. Biomed. Semant., 2010)

Selected papers from the 12th annual Bio-Ontologies meeting. - Larisa N. Soldatova; Phillip W. Lord; Susanna-Assunta Sansone; Susie Stephens; Nigam H. Shah (J. Biomed. Semant., 2010)

An Ontology for Description of Drug Discovery Investigations. - Da Qi; Ross D. King; Andrew L. Hopkins; G. Richard J. Bickerton; Larisa N. Soldatova (J. Integr. Bioinform., 2010)

Using Ontologies in Semantic Data Mining with SEGS and g-SEGS. - Nada Lavrac; Anze Vavpetic; Larisa N. Soldatova; Igor Trajkovski; Petra Kralj Novak (Discovery Science, 2011)

Representation of research hypotheses. - Larisa N. Soldatova; Andrey Rzhetsky (J. Biomed. Semant., 2011)

Selected papers from the 13th Annual Bio-Ontologies Special Interest Group Meeting. - Larisa N. Soldatova; Susanna-Assunta Sansone; Susie Stephens; Nigam H. Shah (J. Biomed. Semant., 2011)

Towards an Ontology of Biomodelling. - Larisa N. Soldatova; Qian Gao 001; David R. Gilbert (CMSB, 2012)

Selected papers from the 14th Annual Bio-Ontologies Special Interest Group Meeting. - Larisa N. Soldatova; Susanna-Assunta Sansone; Michel Dumontier; Nigam H. Shah (J. Biomed. Semant., 2012)

OntoDM-KDD: Ontology for Representing the Knowledge Discovery Process. - Pance Panov; Larisa N. Soldatova; Saso Dzeroski (Discovery Science, 2013)

Auditing Redundant Import in Reuse of a Top Level Ontology for the Drug Discovery Investigations Ontology. - Zhe He 001; Christopher Ochs; Larisa N. Soldatova; Yehoshua Perl; Sivaram Arabandi; James Geller (VDOS+DO@ICBO, 2013)

Representation of probabilistic scientific knowledge. - Larisa N. Soldatova; Andrey Rzhetsky; Kurt De Grave; Ross D. King (J. Biomed. Semant., 2013)

Selected papers from the 15th Annual Bio-Ontologies Special Interest Group Meeting. - Larisa N. Soldatova; Susanna-Assunta Sansone; Michel Dumontier; Nigam H. Shah (J. Biomed. Semant., 2013)

TRAK ontology: Defining standard care for the rehabilitation of knee conditions. - Kate Button; Robert W. van Deursen; Larisa N. Soldatova; Irena Spasic (J. Biomed. Informatics, 2013)

Selected papers from the 16th Annual Bio-Ontologies Special Interest Group Meeting. - Larisa N. Soldatova; Philippe Rocca-Serra; Michel Dumontier; Nigam H. Shah (J. Biomed. Semant., 2014)

EXACT2: the semantics of biomedical protocols. - Larisa N. Soldatova; Daniel Nadis; Ross D. King; Piyali S. Basu; Emma Haddi; Véronique Baumlé; Nigel J. Saunders; Wolfgang Marwan; Brian B. Rudkin (BMC Bioinform., 2014)

Ontology of core data mining entities. - Pance Panov; Larisa N. Soldatova; Saso Dzeroski (Data Min. Knowl. Discov., 2014)

Representing bioinformatics datatypes using the OntoDT ontology. - Pance Panov; Larisa N. Soldatova; Saso Dzeroski (ICBO, 2015)

Ontology Engineering: From an Art to a Craft - The Case of the Data Mining Ontologies. - Larisa N. Soldatova; Pance Panov; Saso Dzeroski (OWLED, 2015)

Meta-QSAR: Learning How to Learn QSARs. - Iván Olier; Crina Grosan; Noureddin Sadawi; Larisa N. Soldatova; Ross D. King (MetaSel@PKDD/ECML, 2015)

Special issue on bio-ontologies and phenotypes. - Larisa N. Soldatova; Nigel Collier; Anika Oellrich; Tudor Groza; Karin Verspoor; Philippe Rocca-Serra; Michel Dumontier; Nigam H. Shah (J. Biomed. Semant., 2015)

Thematic issue of the Second combined Bio-ontologies and Phenotypes Workshop. - Karin Verspoor; Anika Oellrich; Nigel Collier; Tudor Groza; Philippe Rocca-Serra; Larisa N. Soldatova; Michel Dumontier; Nigam Shah (J. Biomed. Semant., 2016)

Generic ontology of datatypes. - Pance Panov; Larisa N. Soldatova; Saso Dzeroski (Inf. Sci., 2016)

An Ontology for Clinical Laboratory Standard Operating Procedures. - Fatima S. Maikore; Gantigmaa Selenge; Adebola Olayinka; Pamela Abbott; Larisa N. Soldatova (JOWO, 2017)

ML-Schema: Exposing the Semantics of Machine Learning with Schemas and Ontologies. - Gustavo Correa Publio; Diego Esteves; Agnieszka Lawrynowicz; Pance Panov; Larisa N. Soldatova; Tommaso Soru; Joaquin Vanschoren; Hamid Zafar (CoRR, 2018)

Meta-QSAR: a large-scale application of meta-learning to drug design and discovery. - Iván Olier; Noureddin Sadawi; G. Richard J. Bickerton; Joaquin Vanschoren; Crina Grosan; Larisa N. Soldatova; Ross D. King (Mach. Learn., 2018)

Automating Sciences: Philosophical and Social Dimensions. - Ross D. King; Vlad Schuler Costa; Chris Mellingwood; Larisa N. Soldatova (IEEE Technol. Soc. Mag., 2018)

Neurodegenerative Disease Data Ontology. - Ana Kostovska; Ilin Tolovski; Fatima S. Maikore; Larisa N. Soldatova; Pance Panov (DS, 2019)

Multi-task learning with a natural metric for quantitative structure activity relationship learning. - Noureddin Sadawi; Iván Olier; Joaquin Vanschoren; Jan N. van Rijn; Jeremy Besnard; G. Richard J. Bickerton; Crina Grosan; Larisa N. Soldatova; Ross D. King (J. Cheminformatics, 2019)

Generating Explainable and Effective Data Descriptors Using Relational Learning: Application to Cancer Biology. - Oghenejokpeme I. Orhobor; Joseph French; Larisa N. Soldatova; Ross D. King (DS, 2020)

Federated Ensemble Regression Using Classification. - Oghenejokpeme I. Orhobor; Larisa N. Soldatova; Ross D. King (DS, 2020)

Guest editors' introduction to the special issue on Discovery Science. - Larisa N. Soldatova; Joaquin Vanschoren (Mach. Learn., 2020)

Comprehensive contextual visualization of a news archive for aiding story planning. - Ishrat Rahman Sami; Tony Russell-Rose; Larisa N. Soldatova (Text2Story@ECIR, 2022)

A Cognitive Theoretical Approach of Rhetorical News Analysis. - Ishrat Rahman Sami; Tony Russell-Rose; Larisa N. Soldatova (Text2Story@ECIR, 2023)

Comprehensive Terms Board Visualization for News Analysis and Editorial Story Planning. - Ishrat Rahman Sami; Tony Russell-Rose; Larisa N. Soldatova (Text2Story@ECIR, 2023)

Besoins ontologiques pour la transformation des aliments. - Damion M. Dooley; Magalie Weber; Liliana Ibanescu; Matthew Lange; Lauren E. Chan; Larisa N. Soldatova; Chen Yang 022; Robert Warren; Cogan Shimizu; Hande McGinty; William Hsiao (IC, 2023)

Guidelines for the reuse of ontology content. - Michael Halper; Larisa N. Soldatova; Mathias Brochhausen; Fatima Sabiu Maikore; Christopher Ochs; Yehoshua Perl (Appl. Ontology, 2023)

The Future of Fundamental Science Led by Generative Closed-Loop Artificial Intelligence. - Hector Zenil; Jesper Tegnér; Felipe S. Abrahão; Alexander Lavin; Vipin Kumar 001; Jeremy G. Frey; Adrian Weller; Larisa N. Soldatova; Alan R. Bundy; Nicholas R. Jennings; Koichi Takahashi; Lawrence Hunter; et al. (CoRR, 2023)

Imbalanced regression using regressor-classifier ensembles. - Oghenejokpeme I. Orhobor; Nastasiya F. Grinberg; Larisa N. Soldatova; Ross D. King (Mach. Learn., 2023)

Scientific Hypothesis Generation by a Large Language Model: Laboratory Validation in Breast Cancer Treatment. - Abbi Abdel-Rehim; Hector Zenil; Oghenejokpeme I. Orhobor; Marie Fisher; Ross J. Collins; Elizabeth Bourne; Gareth W. Fearnley; Emma Tate; Holly X. Smith; Larisa N. Soldatova; Ross D. King (CoRR, 2024)

Genesis: Towards the Automation of Systems Biology Research. - Ievgeniia A. Tiukova; Daniel Brunnsåker; Erik Y. Bjurström; Alexander H. Gower; Filip Kronström; Gabriel K. Reder; Ronald S. Reiserer; Konstantin Korovin; Larisa N. Soldatova; John P. Wikswo; Ross D. King (CoRR, 2024)

Personalised Medicine: Establishing predictive machine learning models for drug responses in patient derived cell culture. - Abbi Abdel-Rehim; Oghenejokpeme I. Orhobor; Gareth Griffiths 006; Larisa N. Soldatova; Ross D. King (CoRR, 2024)

Food process ontology requirements. - Damion M. Dooley; Magalie Weber; Liliana Ibanescu; Matthew Lange; Lauren E. Chan; Larisa N. Soldatova; Chen Yang 022; Robert Warren; Cogan Shimizu; Hande McGinty; William Hsiao (Semantic Web, 2024)