Deep Learning for Isotropic Super-Resolution from Non-isotropic 3D Electron Microscopy. - Larissa Heinrich; John A. Bogovic; Stephan Saalfeld (MICCAI (2), 2017)

Synaptic Cleft Segmentation in Non-isotropic Volume Electron Microscopy of the Complete Drosophila Brain. - Larissa Heinrich; Jan Funke; Constantin Pape; Juan Nunez-Iglesias; Stephan Saalfeld (MICCAI (2), 2018)

Decomposing heterogeneous dynamical systems with graph neural networks. - Cédric Allier; Magdalena C. Schneider; Michael Innerberger; Larissa Heinrich; John A. Bogovic; Stephan Saalfeld (CoRR, 2024)

DaCapo: a modular deep learning framework for scalable 3D image segmentation. - William Patton; Jeff L. Rhoades; Marwan Zouinkhi; David G. Ackerman; Caroline Malin-Mayor; Diane Adjavon; Larissa Heinrich; Davis Bennett; Yurii Zubov; CellMap Project Team; Aubrey V. Weigel; Jan Funke (CoRR, 2024)

DeepPD: Joint Phase and Object Estimation from Phase Diversity with Neural Calibration of a Deformable Mirror. - Magdalena C. Schneider; Courtney Johnson; Cédric Allier; Larissa Heinrich; Diane Adjavon; Joren Husic; Patrick La Riviere; Stephan Saalfeld; Hari Shroff (CoRR, 2025)