An Automated Convergence Diagnostic for Phylogenetic MCMC Analyses. - Lars Berling; Remco R. Bouckaert; Alex Gavryushkin (IEEE ACM Trans. Comput. Biol. Bioinform., 2024)

Accurate Bayesian phylogenetic point estimation using a tree distribution parameterized by clade probabilities. - Lars Berling; Jonathan Klawitter; Remco R. Bouckaert; Dong Xie; Alex Gavryushkin; Alexei J. Drummond (PLoS Comput. Biol., 2025)