Allele dynamics plots for the study of evolutionary dynamics in viral populations. - Lars Steinbrück; Alice Carolyn McHardy (Nucleic Acids Res., 2011)

Inference of Genotype-Phenotype Relationships in the Antigenic Evolution of Human Influenza A (H3N2) Viruses. - Lars Steinbrück; Alice Carolyn McHardy (PLoS Comput. Biol., 2012)

Computational Methods for the Study of Influenza A Virus Phylodynamics. - Lars Steinbrück (2012)

Evaluating assembly and variant calling software for strain-resolved analysis of large DNA viruses. - Zhi-Luo Deng; Akshay Dhingra; Adrian Fritz; Jasper Götting; Philipp C. Münch; Lars Steinbrück; Thomas Friedrich Schulz; Tina Ganzenmüller; Alice C. McHardy (Briefings Bioinform., 2021)