Pheno2GRN: a workflow for phenotype to gene network study and reverse engineering comparison. - Nick Weinandt; Laura M. Jackson; Etienne Z. Gnimpieba; Carol Lushbough (BCB, 2014)

A generic bioinformatics pipeline to integrate large-scale trait data with large phylogenies. - Pasan C. Fernando; Laura M. Jackson; Erliang Zeng; Paula M. Mabee; James P. Balhoff (BIBM, 2017)

medna-metadata: an open-source data management system for tracking environmental DNA samples and metadata. - Melissa Kimble; Steven Allers; K. Campbell; Chaofan Chen; Laura M. Jackson; Benjamin L. King; Samantha Silverbrand; Geneva York; Kate Beard (Bioinform., 2022)