A 3-Approximation Algorithm for the Multiple Spliced Alignment Problem and Its Application to the Gene Prediction Task. - Regina Beretta Mazaro; Leandro Ishi Soares de Lima; Said Sadique Adi (SPIRE, 2014)

De novo algorithms to identify patterns associated with biological events in de Bruijn graphs built from NGS data. (Algorithmes de novo pour l'identification de motifs associés à des événements biologiques dans les graphes de De Bruijn construits à partir de données NGS). - Leandro Ishi Soares de Lima (2019)

The Chain Alignment Problem. - Leandro Ishi Soares de Lima; Said Sadique Adi (J. Comput. Sci., 2020)

A family of tree-based generators for bubbles in directed graphs. - Vicente Acuña; Leandro Ishi Soares de Lima; Giuseppe F. Italiano; Luca Pepè Sciarria; Marie-France Sagot; Blerina Sinaimeri (J. Graph Algorithms Appl., 2021)