Similarity Between the Sequences of Taxol-Selected Peptides and the Disordered Loop of the Anti-Apoptotic Protein, BCL-2. - Diane J. Rodi; Lee Makowski (Pacific Symposium on Biocomputing, 1999)

Estimating the diversity of peptide populations from limited sequence data. - Lee Makowski; Alexei Soares (Bioinform., 2003)

DIVAA: analysis of amino acid diversity in multiple aligned protein sequences. - Diane J. Rodi; Suneeta Mandava; Lee Makowski (Bioinform., 2004)

X-ray coherent diffraction imaging of cellulose fibrils in situ. - Jyotsana Lal; Ross Harder; Lee Makowski (EMBC, 2011)

A new pre-processing method for scanning X-ray microdiffraction patterns. - Yan Zhang; Jiliang Liu; Lee Makowski (BioCAS, 2015)

Maximum a posteriori estimation of relative abundances of protein conformations. - A. Emre Onuk; Murat Akçakaya; Jaydeep P. Bardhan; Deniz Erdogmus; Dana H. Brooks; Lee Makowski (MLSP, 2015)

High performance computing of fiber scattering simulation. - Leiming Yu; Yan Zhang; Xiang Gong; Nilay Roy; Lee Makowski; David R. Kaeli (GPGPU@PPoPP, 2015)

Constrained Maximum Likelihood Estimation of Relative Abundances of Protein Conformation in a Heterogeneous Mixture From Small Angle X-Ray Scattering Intensity Measurements. - A. Emre Onuk; Murat Akçakaya; Jaydeep P. Bardhan; Deniz Erdogmus; Dana H. Brooks; Lee Makowski (IEEE Trans. Signal Process., 2015)

A framework to optimize protein structure from solution scattering using ADMM and an elastic subdomain network. - Biel Roig-Solvas; Jaydeep P. Bardhan; Deniz Erdogmus; Dana H. Brooks; Lee Makowski (ISBI, 2016)

Dirichlet Priors for MAP Inference of Protein Conformation Abundances from SAXS. - A. Emre Onuk; Murat Akçakaya; Jaydeep P. Bardhan; Deniz Erdogmus; Dana H. Brooks; Lee Makowski (J. Signal Process. Syst., 2018)

A Molecular-MNIST Dataset for Machine Learning Study on Diffraction Imaging and Microscopy. - Yan Zhang; Steve Farrell; Michael Crowley; Lee Makowski; Jack Deslippe (CoRR, 2019)

A Proximal Operator for Multispectral Phase Retrieval Problems. - Biel Roig-Solvas; Lee Makowski; Dana H. Brooks (SIAM J. Optim., 2019)