CoaSim: A flexible environment for simulating genetic data under coalescent models. - Thomas Mailund; Mikkel H. Schierup; Christian N. S. Pedersen; Peter J. M. Mechlenborg; Jesper N. Madsen; Leif Schauser (BMC Bioinform., 2005)

PriFi: using a multiple alignment of related sequences to find primers for amplification of homologs. - Jakob Fredslund; Leif Schauser; Lene H. Madsen; Niels Sandal; Jens Stougaard (Nucleic Acids Res., 2005)

GeneRecon - a coalescent based tool for fine-scale association mapping. - Thomas Mailund; Mikkel H. Schierup; Christian N. S. Pedersen; Jesper N. Madsen; Jotun Hein; Leif Schauser (Bioinform., 2006)

GeMprospector - online design of cross-species genetic marker candidates in legumes and grasses. - Jakob Fredslund; Lene H. Madsen; Birgit K. Hougaard; Niels Sandal; Jens Stougaard; David Bertioli; Leif Schauser (Nucleic Acids Res., 2006)