AGenDA: homology-based gene prediction. - Leila Taher; Oliver Rinner; Saurabh Garg; Alexander Sczyrba; Michael Brudno; Serafim Batzoglou; Burkhard Morgenstern (Bioinform., 2003)

AGenDA: gene prediction by cross-species sequence comparison. - Leila Taher; Oliver Rinner; Saurabh Garg; Alexander Sczyrba; Burkhard Morgenstern (Nucleic Acids Res., 2004)

Variable locus length in the human genome leads to ascertainment bias in functional inference for non-coding elements. - Leila Taher; Ivan Ovcharenko (Bioinform., 2009)

CLARE: Cracking the LAnguage of Regulatory Elements. - Leila Taher; Leelavati Narlikar; Ivan Ovcharenko (Bioinform., 2012)

Predicting chromosomal compartments directly from the nucleotide sequence with DNA-DDA. - Xenia Lainscsek; Leila Taher (Briefings Bioinform., 2023)