CistromeMap: a knowledgebase and web server for ChIP-Seq and DNase-Seq studies in mouse and human. - Bo Qin; Meng Zhou; Ying Ge; Len Taing; Tao Liu 022; Qian Wang; Su Wang; Junsheng Chen; Lingling Shen; Xikun Duan; Sheng'en Hu; Wei Li 036; et al. (Bioinform., 2012)

CistromeFinder for ChIP-seq and DNase-seq data reuse. - Hanfei Sun; Bo Qin; Tao Liu 022; Qixuan Wang; Jing Liu; Juan Wang; Xueqiu Lin; Yulin Yang; Len Taing; Prakash K. Rao; Myles Brown; Yong Zhang 006; et al. (Bioinform., 2013)

ChiLin: a comprehensive ChIP-seq and DNase-seq quality control and analysis pipeline. - Qian Qin; Shenglin Mei; Qiu Wu; Hanfei Sun; Lewyn Li; Len Taing; Sujun Chen; Fugen Li; Tao Liu 022; Chongzhi Zang; Han Xu; Yiwen Chen; et al. (BMC Bioinform., 2016)

Cistrome Data Browser: a data portal for ChIP-Seq and chromatin accessibility data in human and mouse. - Shenglin Mei; Qian Qin; Qiu Wu; Hanfei Sun; Rongbin Zheng; Chongzhi Zang; Muyuan Zhu; Jiaxin Wu; Xiaohui Shi; Len Taing; Tao Liu 022; Myles Brown; et al. (Nucleic Acids Res., 2017)

VIPER: Visualization Pipeline for RNA-seq, a Snakemake workflow for efficient and complete RNA-seq analysis. - MacIntosh Cornwell; Mahesh Vangala; Len Taing; Zachary Herbert; Johannes Köster; Bo Li; Hanfei Sun; Taiwen Li; Jian Zhang; Xintao Qiu; Matthew Pun; Rinath Jeselsohn; et al. (BMC Bioinform., 2018)

CoBRA: Containerized Bioinformatics Workflow for Reproducible ChIP/ATAC-seq Analysis. - Xintao Qiu; Avery S. Feit; Ariel Feiglin; Yingtian Xie; Nikolas Kesten; Len Taing; Joseph Perkins; Shengqing Gu; Yihao Li; Paloma Cejas; Ningxuan Zhou; Rinath Jeselsohn; et al. (Genom. Proteom. Bioinform., 2021)

Cistrome Explorer: an interactive visual analysis tool for large-scale epigenomic data. - Sehi L'Yi; Mark S. Keller; Ariaki Dandawate; Len Taing; Chen-Hao Chen; Myles Brown; Clifford A. Meyer; Nils Gehlenborg (Bioinform., 2023)