Defect detection in plain weave fabrics by yarn tracking and fully convolutional networks. - Leon Weninger; Marcin Kopaczka; Dorit Merhof (I2MTC, 2018)

Segmentation of Brain Tumors and Patient Survival Prediction: Methods for the BraTS 2018 Challenge. - Leon Weninger; Oliver Rippel; Simon Koppers; Dorit Merhof (BrainLes@MICCAI (2), 2018)

nipy/nipype: 1.1.2. - Krzysztof J. Gorgolewski; Oscar Esteban; Christopher J. Markiewicz; Erik Ziegler; David Gage Ellis; Michael Philipp Notter; Hans J. Johnson; Dorota Jarecka; Christopher Burns 002; Alexandre Manhães-Savio; Carlo Hämäläinen; Benjamin Yvernault; et al. (Zenodo, 2018)

nipy/nipype: 1.1.3. - Krzysztof J. Gorgolewski; Oscar Esteban; Christopher J. Markiewicz; Erik Ziegler; David Gage Ellis; Dorota Jarecka; Michael Philipp Notter; Hans J. Johnson; Christopher Burns 002; Alexandre Manhães-Savio; Carlo Hämäläinen; Benjamin Yvernault; et al. (Zenodo, 2018)

nipy/nipype: 1.1.4. - Krzysztof J. Gorgolewski; Oscar Esteban; Christopher J. Markiewicz; Erik Ziegler; David Gage Ellis; Dorota Jarecka; Michael Philipp Notter; Hans J. Johnson; Christopher Burns 002; Alexandre Manhães-Savio; Carlo Hamalainen; Benjamin Yvernault; et al. (Zenodo, 2018)

nipy/nipype: 1.1.5. - Krzysztof J. Gorgolewski; Oscar Esteban; Christopher J. Markiewicz; Erik Ziegler; David Gage Ellis; Dorota Jarecka; Michael Philipp Notter; Hans J. Johnson; Christopher Burns 002; Alexandre Manhães-Savio; Carlo Hämäläinen; Benjamin Yvernault; et al. (Zenodo, 2018)

nipy/nipype: 1.1.6. - Krzysztof J. Gorgolewski; Oscar Esteban; Christopher J. Markiewicz; Erik Ziegler; David Gage Ellis; Dorota Jarecka; Michael Philipp Notter; Hans J. Johnson; Christopher Burns 002; Alexandre Manhães-Savio; Carlo Hämäläinen; Benjamin Yvernault; et al. (Zenodo, 2018)

nipy/nipype: 1.1.7. - Krzysztof J. Gorgolewski; Oscar Esteban; Christopher J. Markiewicz; Erik Ziegler; David Gage Ellis; Dorota Jarecka; Michael Philipp Notter; Hans J. Johnson; Christopher Burns 002; Alexandre Manhães-Savio; Carlo Hämäläinen; Benjamin Yvernault; et al. (Zenodo, 2018)

Multi-task Learning for Brain Tumor Segmentation. - Leon Weninger; Qianyu Liu; Dorit Merhof (BrainLes@MICCAI (1), 2019)

Combined Learning for Similar Tasks with Domain-Switching Networks. - Daniel Bug; Dennis Eschweiler; Qianyu Liu; Justus Schock; Leon Weninger; Friedrich Feuerhake; Julia Schüler; Johannes Stegmaier; Dorit Merhof (MICCAI (5), 2019)

Semantic Segmentation of Brain Tumors in MRI Data Without any Labels. - Leon Weninger; Imke Krauhausen; Dorit Merhof (VCBM, 2019)

Radiomic Feature Stability Analysis based on Probabilistic Segmentations. - Christoph Haarburger; Justus Schock; Daniel Truhn; Philippe Weitz; Leon Weninger; Dorit Merhof (CoRR, 2019)

ModelHub.AI: Dissemination Platform for Deep Learning Models. - Ahmed Hosny; Michael Schwier; Christoph Berger; Evin Pinar Örnek; Mehmet Turan; Phi V. Tran; Leon Weninger; Fabian Isensee; Klaus H. Maier-Hein; Richard McKinley; Michael T. Lu; Udo Hoffmann; et al. (CoRR, 2019)

Robustness of Radiomics for Survival Prediction of Brain Tumor Patients Depending on Resection Status. - Leon Weninger; Christoph Haarburger; Dorit Merhof (Frontiers Comput. Neurosci., 2019)

nipy/nipype: 1.1.8. - Krzysztof J. Gorgolewski; Oscar Esteban; Christopher J. Markiewicz; Erik Ziegler; David Gage Ellis; Dorota Jarecka; Michael Philipp Notter; Hans J. Johnson; Christopher Burns 002; Alexandre Manhães-Savio; Carlo Hämäläinen; Benjamin Yvernault; et al. (Zenodo, 2019)

nipy/nipype: 1.1.9. - Krzysztof J. Gorgolewski; Oscar Esteban; Christopher J. Markiewicz; Erik Ziegler; David Gage Ellis; Dorota Jarecka; Michael Philipp Notter; Hans J. Johnson; Christopher Burns 002; Alexandre Manhães-Savio; Carlo Hämäläinen; Benjamin Yvernault; et al. (Zenodo, 2019)

nipy/nipype: 1.2.0. - Krzysztof J. Gorgolewski; Oscar Esteban; Christopher J. Markiewicz; Erik Ziegler; David Gage Ellis; Dorota Jarecka; Michael Philipp Notter; Hans J. Johnson; Christopher Burns 002; Alexandre Manhães-Savio; Carlo Hämäläinen; Benjamin Yvernault; et al. (Zenodo, 2019)

nipy/nipype: 1.2.1. - Krzysztof J. Gorgolewski; Oscar Esteban; Christopher J. Markiewicz; Erik Ziegler; David Gage Ellis; Dorota Jarecka; Hans J. Johnson; Michael Philipp Notter; Christopher Burns 002; Alexandre Manhães-Savio; Carlo Hämäläinen; Benjamin Yvernault; et al. (Zenodo, 2019)

nipy/nipype: 1.2.3. - Oscar Esteban; Christopher J. Markiewicz; Erik Ziegler; David Gage Ellis; Dorota Jarecka; Hans J. Johnson; Michael Philipp Notter; Christopher Burns 002; Alexandre Manhães-Savio; Carlo Hämäläinen; Benjamin Yvernault; Taylor Salo; et al. (Zenodo, 2019)

nipy/nipype: 1.2.2. - Krzysztof J. Gorgolewski; Oscar Esteban; Christopher J. Markiewicz; Erik Ziegler; David Gage Ellis; Dorota Jarecka; Hans J. Johnson; Michael Philipp Notter; Christopher Burns 002; Alexandre Manhães-Savio; Carlo Hämäläinen; Benjamin Yvernault; et al. (Zenodo, 2019)

nipy/nipype: 1.2.2. - Krzysztof J. Gorgolewski; Oscar Esteban; Christopher J. Markiewicz; Erik Ziegler; David Gage Ellis; Dorota Jarecka; Hans J. Johnson; Michael Philipp Notter; Christopher Burns 002; Alexandre Manhães-Savio; Carlo Hämäläinen; Benjamin Yvernault; et al. (Zenodo, 2019)

nipy/nipype: 1.3.0-rc1. - Oscar Esteban; Christopher J. Markiewicz; Dorota Jarecka; Erik Ziegler; Hans J. Johnson; Christopher Burns 002; Alexandre Manhães-Savio; Carlo Hämäläinen; Michael Philipp Notter; Benjamin Yvernault; David Gage Ellis; Taylor Salo; et al. (Zenodo, 2019)

nipy/nipype: 1.3.0. - Oscar Esteban; Christopher J. Markiewicz; Dorota Jarecka; Erik Ziegler; Hans J. Johnson; Christopher Burns 002; Alexandre Manhães-Savio; Carlo Hämäläinen; Michael Philipp Notter; Benjamin Yvernault; David Gage Ellis; Taylor Salo; et al. (Zenodo, 2019)

nipy/nipype: 1.4.0. - Oscar Esteban; Christopher J. Markiewicz; Christopher Burns 002; Hans J. Johnson; Erik Ziegler; Alexandre Manhães-Savio; Dorota Jarecka; David Gage Ellis; Benjamin Yvernault; Carlo Hämäläinen; Michael Philipp Notter; Taylor Salo; et al. (Zenodo, 2019)

Radiomic Feature Stability Analysis Based on Probabilistic Segmentations. - Christoph Haarburger; Justus Schock; Daniel Truhn; Philippe Weitz; Gustav Mueller-Franzes; Leon Weninger; Dorit Merhof (ISBI, 2020)

AutoML Segmentation for 3D Medical Image Data: Contribution to the MSD Challenge 2018. - Oliver Rippel; Leon Weninger; Dorit Merhof (CoRR, 2020)

Cross-scanner and cross-protocol multi-shell diffusion MRI data harmonization: Algorithms and results. - Lipeng Ning; Elisenda Bonet-Carne; Francesco Grussu; Farshid Sepehrband; Enrico Kaden; Jelle Veraart; Stefano B. Blumberg; Can Son Khoo; Marco Palombo; Iasonas Kokkinos; Daniel C. Alexander; Jaume Coll-Font; et al. (NeuroImage, 2020)

nipy/nipype: 1.4.1. - Oscar Esteban; Christopher J. Markiewicz; Hans J. Johnson; Erik Ziegler; Alexandre Manhães-Savio; Dorota Jarecka; Christopher Burns 002; David Gage Ellis; Carlo Hämäläinen; Michael Philipp Notter; Benjamin Yvernault; Taylor Salo; et al. (Zenodo, 2020)

nipy/nipype: 1.4.2. - Oscar Esteban; Christopher J. Markiewicz; Hans J. Johnson; Erik Ziegler; Alexandre Manhães-Savio; Dorota Jarecka; Christopher Burns 002; David Gage Ellis; Carlo Hämäläinen; Michael Philipp Notter; Benjamin Yvernault; Taylor Salo; et al. (Zenodo, 2020)

nipy/nipype: 1.5.0. - Oscar Esteban; Christopher J. Markiewicz; Christopher Burns 002; Mathias Goncalves; Dorota Jarecka; Erik Ziegler; Shoshana Berleant; David Gage Ellis; Basile Pinsard; Cindee Madison; Michael Waskom; Michael Philipp Notter; et al. (Zenodo, 2020)

nipy/nipype: 1.5.1. - Oscar Esteban; Christopher J. Markiewicz; Christopher Burns 002; Mathias Goncalves; Dorota Jarecka; Erik Ziegler; Shoshana Berleant; David Gage Ellis; Basile Pinsard; Cindee Madison; Michael Waskom; Michael Philipp Notter; et al. (Zenodo, 2020)

Autoencoder-based Quality Assessment for Synthetic Diffusion-MRI Data. - Leon Weninger; Maxim Drobjazko; Chuh-Hyoun Na; Kerstin Jütten; Dorit Merhof (Bildverarbeitung für die Medizin, 2021)

Improving Localization of Brain Tumors through 3D GAN Inpainting. - Leon Weninger; Andre Gilerson; Dorit Merhof (EMBC, 2021)

nipy/nipype: 1.7.0. - Oscar Esteban; Christopher J. Markiewicz; Christopher Burns 002; Mathias Goncalves; Dorota Jarecka; Erik Ziegler; Shoshana Berleant; David Gage Ellis; Basile Pinsard; Cindee Madison; Michael Waskom; Michael Philipp Notter; et al. (Zenodo, 2021)

Diffusion MRI Specific Pretraining by Self-supervision on an Auxiliary Dataset. - Leon Weninger; Jarek Ecke; Chuh-Hyoun Na; Kerstin Jütten; Dorit Merhof (Bildverarbeitung für die Medizin, 2022)

Harmonization of Diffusion MRI Data Obtained with Multiple Head Coils Using Hybrid CNNs. - Leon Weninger; Sandro Romanzetti; Julia Ebert; Kathrin Reetz; Dorit Merhof (ECCV Workshops (7), 2022)

From Supervised to Unsupervised Harmonization of Diffusion Mri Acquisitions. - Leon Weninger; Mushawar Ahmad; Dorit Merhof (ISBI, 2022)

nipy/nipype: 1.7.1. - Oscar Esteban; Christopher J. Markiewicz; Christopher Burns 002; Mathias Goncalves; Dorota Jarecka; Erik Ziegler; Shoshana Berleant; David Gage Ellis; Basile Pinsard; Cindee Madison; Michael Waskom; Michael Philipp Notter; et al. (Zenodo, 2022)

nipy/nipype: 1.8.0. - Oscar Esteban; Christopher J. Markiewicz; Christopher Burns 002; Mathias Goncalves; Dorota Jarecka; Erik Ziegler; Shoshana Berleant; David Gage Ellis; Basile Pinsard; Cindee Madison; Michael Waskom; Michael Philipp Notter; et al. (Zenodo, 2022)

nipy/nipype: 1.8.1. - Oscar Esteban; Christopher J. Markiewicz; Christopher Burns 002; Mathias Goncalves; Dorota Jarecka; Erik Ziegler; Shoshana Berleant; David Gage Ellis; Basile Pinsard; Cindee Madison; Michael Waskom; Michael Philipp Notter; et al. (Zenodo, 2022)

nipy/nipype: 1.8.3. - Oscar Esteban; Christopher J. Markiewicz; Christopher Burns 002; Mathias Goncalves; Dorota Jarecka; Erik Ziegler; Shoshana Berleant; David Gage Ellis; Basile Pinsard; Cindee Madison; Michael Waskom; Michael Philipp Notter; et al. (Zenodo, 2022)

The Liver Tumor Segmentation Benchmark (LiTS). - Patrick Bilic; Patrick Ferdinand Christ; Hongwei Li 004; Eugene Vorontsov; Avi Ben-Cohen; Georgios Kaissis; Adi Szeskin; Colin Jacobs; Gabriel Efrain Humpire Mamani; Gabriel Chartrand; Fabian Lohöfer; Julian Walter Holch; et al. (Medical Image Anal., 2023)

Novel Deep Learning Approaches for Analyzing Diffusion Imaging Data. - Yousef Sadegheih; Leon Weninger; Dorit Merhof (Künstliche Intell., 2025)