Exon expression QTL (eeQTL) analysis highlights distant genomic variations associated with splicing regulation. - Leying Guan; Qian Yang; Mengting Gu; Liang Chen; Xuegong Zhang (Quant. Biol., 2014)

Scalable multi-sample single-cell data analysis by Partition-Assisted Clustering and Multiple Alignments of Networks. - Ye Henry Li; Dangna Li; Nikolay Samusik; Xiaowei Wang; Leying Guan; Garry P. Nolan; Wing Hung Wong (PLoS Comput. Biol., 2017)

GAN-based federated learning for label protection in binary classification. - Yujin Han; Leying Guan (CoRR, 2023)

Conformalized Semi-supervised Random Forest for Classification and Abnormality Detection. - Yujin Han; Mingwenchan Xu; Leying Guan (AISTATS, 2024)

Flexible Fairness Learning via Inverse Conditional Permutation. - Yuheng Lai; Leying Guan (CoRR, 2024)

Smooth and Probabilistic PARAFAC Model with Auxiliary Covariates. - Leying Guan (J. Comput. Graph. Stat., 2024)

Putting computational models of immunity to the test - An invited challenge to predict B.pertussis vaccination responses. - Pramod Shinde; Lisa Willemsen; Michael Anderson; Minori Aoki; Saonli Basu; Julie G. Burel; Peng Cheng; Souradipto Ghosh Dastidar; Aidan Dunleavy; Tal Einav; Jamie Forschmiedt; Slim Fourati; et al. (PLoS Comput. Biol., 2025)