Minimum-time control for structurally persistent continuous Petri Nets. - Liewei Wang; Cristian Mahulea; Jorge Júlvez; Manuel Silva Suárez (CDC, 2010)

Control of continuous Petri nets using ON/OFF based method. - Liewei Wang; Cristian Mahulea; Jorge Júlvez; Manuel Silva Suárez (WODES, 2012)

Distributed Model Predictive Control of timed continuous Petri nets. - Liewei Wang; Cristian Mahulea; Manuel Silva Suárez (CDC, 2013)

Minimum-time flow control of timed continuous Choice-Free nets. - Liewei Wang; Cristian Mahulea; Manuel Silva 001 (ECC, 2013)

Developing Intermediary Medication Phenotypes via Metabolomics Biotechnology Using an Electronic Health Record-Linked Biobank. - Matthew K. Breitenstein; Richard M. Weinshilboum; Jyotishman Pathak; Liewei Wang (AMIA, 2015)

Using EHR-Linked Biobank Data to Study Metformin Pharmacogenomics. - Matthew K. Breitenstein; György J. Simon; Euijung Ryu; Sebastian M. Armasu; Richard M. Weinshilboum; Liewei Wang; Jyotishman Pathak (MIE, 2015)

Unsupervised single-cell analysis in triple-negative breast cancer: A case study. - Arjun P. Athreya; Alan J. Gaglio; Zbigniew T. Kalbarczyk; Ravishankar K. Iyer; Junmei Cairns; Krishna R. Kalari; Richard M. Weinshilboum; Liewei Wang (BIBM, 2016)

Beta-Poisson model for single-cell RNA-seq data analyses. - Trung-Nghia Vu; Quin F. Wills; Krishna R. Kalari; Nifang Niu; Liewei Wang; Mattias Rantalainen; Yudi Pawitan (Bioinform., 2016)

Measure transcript integrity using RNA-seq data. - Liguo Wang 002; Jinfu J. Nie; Hugues Sicotte; Ying Li; Jeanette E. Eckel-Passow; Surendra Dasari; Peter T. Vedell; Poulami Barman; Liewei Wang; Richard Weinshiboum; Jin Jen; Haojie Huang; et al. (BMC Bioinform., 2016)

Data-driven longitudinal modeling and prediction of symptom dynamics in major depressive disorder: Integrating factor graphs and learning methods. - Arjun P. Athreya; Subho S. Banerjee; Drew Neavin; Rima Kaddurah-Daouk; A. John Rush; Mark A. Frye; Liewei Wang; Richard M. Weinshilboum; William V. Bobo; Ravishankar K. Iyer (CIBCB, 2017)

Decentralised control of continuous Petri nets. - Liewei Wang; Xu Wang 019 (Int. J. Control, 2017)

Considerations for automated machine learning in clinical metabolic profiling: Altered homocysteine plasma concentration associated with metformin exposure. - Alena Orlenko; Jason H. Moore; Patryk Orzechowski; Randal S. Olson; Junmei Cairns; Pedro J. Caraballo; Richard M. Weinshilboum; Liewei Wang; Matthew K. Breitenstein (PSB, 2018)

Isoform-level gene expression patterns in single-cell RNA-sequencing data. - Trung-Nghia Vu; Quin F. Wills; Krishna R. Kalari; Nifang Niu; Liewei Wang; Yudi Pawitan; Mattias Rantalainen (Bioinform., 2018)

HGT-ID: an efficient and sensitive workflow to detect human-viral insertion sites using next-generation sequencing data. - Saurabh Baheti; Xiaojia Tang; Daniel R. O'Brien; Nicholas Chia; Lewis R. Roberts; Heidi Nelson; Judy C. Boughey; Liewei Wang; Matthew P. Goetz; Jean-Pierre A. Kocher; Krishna R. Kalari (BMC Bioinform., 2018)

Augmentation of Physician Assessments with Multi-Omics Enhances Predictability of Drug Response: A Case Study of Major Depressive Disorder. - Arjun P. Athreya; Ravishankar K. Iyer; Drew Neavin; Liewei Wang; Richard M. Weinshilboum; Rima Kaddurah-Daouk; A. John Rush; Mark A. Frye; William V. Bobo (IEEE Comput. Intell. Mag., 2018)

Cell-level somatic mutation detection from single-cell RNA sequencing. - Trung-Nghia Vu; Ha-Nam Nguyen; Stefano Calza; Krishna R. Kalari; Liewei Wang; Yudi Pawitan (Bioinform., 2019)

Identification of pathways associated with chemosensitivity through network embedding. - Sheng Wang 001; Edward W. Huang; Junmei Cairns; Jian Peng 001; Liewei Wang; Saurabh Sinha (PLoS Comput. Biol., 2019)

Alternating EM algorithm for a bilinear model in isoform quantification from RNA-seq data. - Wenjiang Deng; Tian Mou; Krishna R. Kalari; Nifang Niu; Liewei Wang; Yudi Pawitan; Trung-Nghia Vu (Bioinform., 2020)

Preclinical-to-clinical Anti-cancer Drug Response Prediction and Biomarker Identification Using TINDL. - David Earl Hostallero; Lixuan Wei; Liewei Wang; Junmei Cairns; Amin Emad (Genom. Proteom. Bioinform., 2023)

Advancing efficacy prediction for electronic health records based emulated trials in repurposing heart failure therapies. - Nansu Zong; Shaika Chowdhury; Shibo Zhou; Sivaraman Rajaganapathy; Yue Yu; Liewei Wang; Qiying Dai; Pengyang Li; Xiaoke Liu; Suzette J. Bielinski; Jun Chen; Yongbin Chen; et al. (npj Digit. Medicine, 2025)