Integrating data and knowledge to identify functional modules of genes: a multilayer approach. - Lifan Liang; Vicky Chen; Kunju Zhu; Xiaonan Fan 001; Xinghua Lu 001; Songjian Lu (BMC Bioinform., 2019)

Noisy and Incomplete Boolean Matrix Factorizationvia Expectation Maximization. - Lifan Liang; Songjian Lu (CoRR, 2019)

BEM: Mining Coregulation Patterns in Transcriptomics via Boolean Matrix Factorization. - Lifan Liang; Kunju Zhu; Songjian Lu (Bioinform., 2020)

ORN: Inferring patient-specific dysregulation status of pathway modules in cancer with OR-gate Network. - Lifan Liang; Kunju Zhu; Junyan Tao; Songjian Lu (PLoS Comput. Biol., 2021)

CALM: Convolution As Local Mixture. - Lifan Liang (CoRR, 2024)