A Comparison of Impact Factor, Clinical Query Filters, and Pattern Recognition Query Filters in Terms of Sensitivity to Topic. - Lawrence D. Fu; Lily Wang 001; Yindalon Aphinyanagphongs; Constantin F. Aliferis (MedInfo, 2007)

Supervised principal component analysis for gene set enrichment of microarray data with continuous or survival outcomes. - Xi Chen; Lily Wang 001; Jonathan D. Smith; Bing Zhang 003 (Bioinform., 2008)

A comprehensive comparison of random forests and support vector machines for microarray-based cancer classification. - Alexander R. Statnikov; Lily Wang 001; Constantin F. Aliferis (BMC Bioinform., 2008)

Integrating Biological Knowledge with Gene Expression Profiles for Survival Prediction of Cancer. - Xi Chen; Lily Wang 001 (J. Comput. Biol., 2009)

An efficient hierarchical generalized linear mixed model for pathway analysis of genome-wide association studies. - Lily Wang 001; Peilin Jia; Russell D. Wolfinger; Xi Chen; Britney L. Grayson; Thomas M. Aune; Zhongming Zhao (Bioinform., 2011)

A comparison of evaluation metrics for biomedical journals, articles, and websites in terms of sensitivity to topic. - Lawrence D. Fu; Yindalon Aphinyanaphongs; Lily Wang 001; Constantin F. Aliferis (J. Biomed. Informatics, 2011)

Network-Assisted Investigation of Combined Causal Signals from Genome-Wide Association Studies in Schizophrenia. - Peilin Jia; Lily Wang 001; Ayman H. Fanous; Carlos N. Pato; Todd L. Edwards; Zhongming Zhao (PLoS Comput. Biol., 2012)

Deciphering Signaling Pathway Networks to Understand the Molecular Mechanisms of Metformin Action. - Jingchun Sun; Min Zhao 006; Peilin Jia; Lily Wang 001; Yonghui Wu; Carissa Iverson; Yubo Zhou; Erica A. Bowton; Dan M. Roden; Joshua C. Denny; Melinda C. Aldrich; Hua Xu 001; et al. (PLoS Comput. Biol., 2015)

Network module-based model in the differential expression analysis for RNA-seq. - Mingli Lei; Jia Xu; Li-Ching Huang; Lily Wang 001; Jing Li (Bioinform., 2017)

PathwaySplice: an R package for unbiased pathway analysis of alternative splicing in RNA-Seq data. - Aimin Yan; Yuguang Ban; Zhen Gao; Xi Chen; Lily Wang 001 (Bioinform., 2018)

An evaluation of supervised methods for identifying differentially methylated regions in Illumina methylation arrays. - Saurav Mallik; Gabriel J. Odom; Zhen Gao; Lissette Gomez; Xi Chen; Lily Wang 001 (Briefings Bioinform., 2019)