LigDockCSA: Protein-ligand docking using conformational space annealing. - Woong-Hee Shin; Lim Heo; Juyong Lee; Junsu Ko; Chaok Seok; Jooyoung Lee 002 (J. Comput. Chem., 2011)

GalaxyWEB server for protein structure prediction and refinement. - Junsu Ko; Hahnbeom Park; Lim Heo; Chaok Seok (Nucleic Acids Res., 2012)

GalaxyRefine: protein structure refinement driven by side-chain repacking. - Lim Heo; Hahnbeom Park; Chaok Seok (Nucleic Acids Res., 2013)

GalaxySite: ligand-binding-site prediction by using molecular docking. - Lim Heo; Woong-Hee Shin; Myeong Sup Lee; Chaok Seok (Nucleic Acids Res., 2014)

GalaxyPepDock: a protein-peptide docking tool based on interaction similarity and energy optimization. - Hasup Lee 002; Lim Heo; Myeong Sup Lee; Chaok Seok (Nucleic Acids Res., 2015)

GalaxyHomomer: a web server for protein homo-oligomer structure prediction from a monomer sequence or structure. - Minkyung Baek; Taeyong Park 002; Lim Heo; Chiwook Park; Chaok Seok (Nucleic Acids Res., 2017)

PREFMD: a web server for protein structure refinement via molecular dynamics simulations. - Lim Heo; Michael Feig (Bioinform., 2018)

GalaxyRefine2: simultaneous refinement of inaccurate local regions and overall protein structure. - Gyu Rie Lee; Jonghun Won; Lim Heo; Chaok Seok (Nucleic Acids Res., 2019)

GalaxyWater-wKGB: Prediction of Water Positions on Protein Structure Using wKGB Statistical Potential. - Lim Heo; Sangwoo Park; Chaok Seok (J. Chem. Inf. Model., 2021)