Standardizing biomass reactions and ensuring complete mass balance in genome-scale metabolic models. - Siu Hung Joshua Chan; Jingyi Cai; Lin Wang 031; Margaret N. Simons-Senftle; Costas D. Maranas (Bioinform., 2017)

Accelerating flux balance calculations in genome-scale metabolic models by localizing the application of loopless constraints. - Siu Hung Joshua Chan; Lin Wang 031; Satyakam Dash; Costas D. Maranas (Bioinform., 2018)

dGPredictor: Automated fragmentation method for metabolic reaction free energy prediction and de novo pathway design. - Lin Wang 031; Vikas Upadhyay; Costas D. Maranas (PLoS Comput. Biol., 2021)