Multi-contrast deep nuclei segmentation using a probabilistic atlas. - Linda Marrakchi-Kacem; Cyril Poupon; Jean-François Mangin; Fabrice Poupon (ISBI, 2010)

Inference of a HARDI Fiber Bundle Atlas Using a Two-Level Clustering Strategy. - Pamela Guevara; Cyril Poupon; Denis Rivière; Yann Cointepas; Linda Marrakchi-Kacem; Maxime Descoteaux; Pierre Fillard; Bertrand Thirion; Jean-François Mangin (MICCAI (1), 2010)

Analysis of the Striato-Thalamo-Cortical Connectivity on the Cortical Surface to Infer Biomarkers of Huntington's Disease. - Linda Marrakchi-Kacem; Christine Delmaire; Alan Tucholka; Pauline Roca; Pamela Guevara; Fabrice Poupon; Jérôme Yelnik; Alexandra Durr; Jean-François Mangin; Stéphane Lehéricy (MICCAI (2), 2010)

Segmentation of Short Association Bundles in Massive Tractography Datasets Using a Multi-subject Bundle Atlas. - Pamela Guevara; Delphine Duclap; Cyril Poupon; Linda Marrakchi-Kacem; Josselin Houenou; Marion Leboyer; Jean-François Mangin (CIARP, 2011)

Automatic fiber bundle segmentation in massive tractography datasets using a multi-subject bundle atlas. - Pamela Guevara; Delphine Duclap; Cyril Poupon; Linda Marrakchi-Kacem; Pierre Fillard; Denis Le Bihan; Marion Leboyer; Josselin Houenou; Jean-François Mangin (NeuroImage, 2012)

Evolutionary medical image registration using automatic parameter tuning. - Andrea Valsecchi; Jérémie Dubois-Lacoste; Thomas Stützle; Sergio Damas; José Santamaría; Linda Marrakchi-Kacem (IEEE Congress on Evolutionary Computation, 2013)

Genetic algorithms for Voxel-based medical image registration. - Andrea Valsecchi; Sergio Damas; José Santamaría; Linda Marrakchi-Kacem (CIMI, 2013)

Bayesian Atlas Estimation for the Variability Analysis of Shape Complexes. - Pietro Gori; Olivier Colliot; Yulia Worbe; Linda Marrakchi-Kacem; Sophie Lecomte; Cyril Poupon; Andreas Hartmann; Nicholas Ayache; Stanley Durrleman (MICCAI (1), 2013)

Using tractography to infer Basal ganglia's functional subterritories distribution change in Huntington disease. - Linda Marrakchi-Kacem; Christine Delmaire; Fabrice Poupon; Pamela Guevara; Sophie Lecomte; Jérôme Yelnik; Jean-François Mangin; Alexandra Durr; Stéphane Lehéricy; Cyril Poupon (ATSIP, 2014)

Automatic evolutionary medical image segmentation using deformable models. - Andrea Valsecchi; Pablo Mesejo; Linda Marrakchi-Kacem; Stefano Cagnoni; Sergio Damas (IEEE Congress on Evolutionary Computation, 2014)

A Prototype Representation to Approximate White Matter Bundles with Weighted Currents. - Pietro Gori; Olivier Colliot; Linda Marrakchi-Kacem; Yulia Worbe; Fabrizio de Vico Fallani; Mario Chavez; Sophie Lecomte; Cyril Poupon; Andreas Hartmann; Nicholas Ayache; Stanley Durrleman (MICCAI (3), 2014)

Intensity-based image registration using scatter search. - Andrea Valsecchi; Sergio Damas; José Santamaría; Linda Marrakchi-Kacem (Artif. Intell. Medicine, 2014)

Joint Morphometry of Fiber Tracts and Gray Matter Structures Using Double Diffeomorphisms. - Pietro Gori; Olivier Colliot; Linda Marrakchi-Kacem; Yulia Worbe; Alexandre Routier; Cyril Poupon; Andreas Hartmann; Nicholas Ayache; Stanley Durrleman (IPMI, 2015)

Biomedical image segmentation using geometric deformable models and metaheuristics. - Pablo Mesejo; Andrea Valsecchi; Linda Marrakchi-Kacem; Stefano Cagnoni; Sergio Damas (Comput. Medical Imaging Graph., 2015)

Intra-subject multi-slab registration: Application to hippocampal ultra-high resolution imaging at 7T. - Linda Marrakchi-Kacem; Alexandre Vignaud; Julien Sein; Johanne Germain; Thomas R. Henry; Cyril Poupon; Lucie Hertz-Pannier; Stéphane Lehéricy; Olivier Colliot; Pierre-François van de Moortele; Marie Chupin (ATSIP, 2016)

Robust imaging of hippocampal inner structure at 7T: in vivo acquisition protocol and methodological choices. - Linda Marrakchi-Kacem; Alexandre Vignaud; Julien Sein; Johanne Germain; Thomas R. Henry; Cyril Poupon; Lucie Hertz-Pannier; Stéphane Lehéricy; Olivier Colliot; Pierre-François van de Moortele; Marie Chupin (CoRR, 2016)

Parsimonious Approximation of Streamline Trajectories in White Matter Fiber Bundles. - Pietro Gori; Olivier Colliot; Linda Marrakchi-Kacem; Yulia Worbe; Fabrizio de Vico Fallani; Mario Chavez; Cyril Poupon; Andreas Hartmann; Nicholas Ayache; Stanley Durrleman (IEEE Trans. Medical Imaging, 2016)

A Bayesian framework for joint morphometry of surface and curve meshes in multi-object complexes. - Pietro Gori; Olivier Colliot; Linda Marrakchi-Kacem; Yulia Worbe; Cyril Poupon; Andreas Hartmann; Nicholas Ayache; Stanley Durrleman (Medical Image Anal., 2017)

Double Diffeomorphism: Combining Morphometry and Structural Connectivity Analysis. - Pietro Gori; Olivier Colliot; Linda Marrakchi-Kacem; Yulia Worbe; Alexandre Routier; Cyril Poupon; Andreas Hartmann; Nicholas Ayache; Stanley Durrleman (IEEE Trans. Medical Imaging, 2018)

A Diffeomorphic Vector Field Approach to Analyze the Thickness of the Hippocampus From 7 T MRI. - Alexis Guyot; Ana B. Graciano Fouquier; Emilie Gerardin; Marie Chupin; Joan Alexis Glaunès; Linda Marrakchi-Kacem; Johanne Germain; Claire Boutet; Claire Cury; Lucie Hertz-Pannier; Alexandre Vignaud; Stanley Durrleman; et al. (IEEE Trans. Biomed. Eng., 2021)

Training Hacks and a Frugal Man's Net with Application to Glioblastoma Segmentation. - Jawher Ben Abdallah; Linda Marrakchi-Kacem; Islem Rekik (ATSIP, 2022)

Automatic Classification of Parkinson's Disease Through the Fusion of Sustained Vowel Descriptors. - Sahar Hafsi; Linda Marrakchi-Kacem; Farouk Mhamdi; Sonia Djaziri-Larbi (BIOSTEC (1), 2025)