Ling Luo

Orcid: 0000-0002-5141-0259

Affiliations:
  • National Institutes of Health, Bethesda, MD, USA
  • Dalian University of Technology, College of Computer Science and Technology, China (former)


According to our database1, Ling Luo authored at least 37 papers between 2015 and 2024.

Collaborative distances:
  • Dijkstra number2 of five.
  • Erdős number3 of four.

Timeline

Legend:

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PhD thesis 
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Links

Online presence:

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Bibliography

2024
PubTator 3.0: an AI-powered Literature Resource for Unlocking Biomedical Knowledge.
CoRR, 2024

From Retrieval to Generation: A Simple and Unified Generative Model for End-to-End Task-Oriented Dialogue.
Proceedings of the Thirty-Eighth AAAI Conference on Artificial Intelligence, 2024

2023
Term-BLAST-like alignment tool for concept recognition in noisy clinical texts.
Bioinform., December, 2023

BioREx: Improving biomedical relation extraction by leveraging heterogeneous datasets.
J. Biomed. Informatics, October, 2023

GNorm2: an improved gene name recognition and normalization system.
Bioinform., October, 2023

AIONER: all-in-one scheme-based biomedical named entity recognition using deep learning.
Bioinform., May, 2023

Taiyi: A Bilingual Fine-Tuned Large Language Model for Diverse Biomedical Tasks.
CoRR, 2023

Joint Biomedical Entity and Relation Extraction with Unified Interaction Maps.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2023

Joint Biomedical Entity and Relation Extraction Based on Triple Region Vertices.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2023

2022
PhenoRerank: A re-ranking model for phenotypic concept recognition pre-trained on human phenotype ontology.
J. Biomed. Informatics, 2022

A sequence labeling framework for extracting drug-protein relations from biomedical literature.
Database J. Biol. Databases Curation, 2022

Assigning species information to corresponding genes by a sequence labeling framework.
Database J. Biol. Databases Curation, 2022

BioRED: a rich biomedical relation extraction dataset.
Briefings Bioinform., 2022

PhenoGene: Disease-gene prioritization using graph embedding on patient phenotypic profiles.
Proceedings of the AMIA 2022, 2022

BioRED: A Comprehensive Biomedical Relation Extraction Dataset.
Proceedings of the AMIA 2022, 2022

2021
LitSuggest: a web-based system for literature recommendation and curation using machine learning.
Nucleic Acids Res., 2021

PhenoTagger: a hybrid method for phenotype concept recognition using human phenotype ontology.
Bioinform., 2021

2020
KGHC: a knowledge graph for hepatocellular carcinoma.
BMC Medical Informatics Decis. Mak., 2020

A neural network-based joint learning approach for biomedical entity and relation extraction from biomedical literature.
J. Biomed. Informatics, 2020

Exploiting adversarial transfer learning for adverse drug reaction detection from texts.
J. Biomed. Informatics, 2020

Artificial Intelligence (AI) in Action: Addressing the COVID-19 Pandemic with Natural Language Processing (NLP).
CoRR, 2020

Exploiting sequence labeling framework to extract document-level relations from biomedical texts.
BMC Bioinform., 2020

2019
KeSACNN: a protein-protein interaction article classification approach based on deep neural network.
Int. J. Data Min. Bioinform., 2019

Overview of the BioCreative VI Precision Medicine Track: mining protein interactions and mutations for precision medicine.
Database J. Biol. Databases Curation, 2019

A Deep Learning Approach With Deep Contextualized Word Representations for Chemical-Protein Interaction Extraction From Biomedical Literature.
IEEE Access, 2019

DUTIR at TREC 2019: Precision Medicine Track.
Proceedings of the Twenty-Eighth Text REtrieval Conference, 2019

2018
A neural network approach to chemical and gene/protein entity recognition in patents.
J. Cheminformatics, 2018

An attention-based BiLSTM-CRF approach to document-level chemical named entity recognition.
Bioinform., 2018

Document triage for identifying protein-protein interactions affected by mutations: a neural network ensemble approach.
Database J. Biol. Databases Curation, 2018

DUTIR at the CCKS-2018 Task1: A Neural Network Ensemble Approach for Chinese Clinical Named Entity Recognition.
Proceedings of the Evaluation Tasks at the China Conference on Knowledge Graph and Semantic Computing (CCKS 2018), 2018

Protein-Protein Interaction Article Classification: A Knowledge-enriched Self-Attention Convolutional Neural Network Approach.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2018

HMNPPID: A Database of Protein-protein Interactions Associated with Human Malignant Neoplasms.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2018

A multi-task learning based approach to biomedical entity relation extraction.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2018

2017
An attention-based effective neural model for drug-drug interactions extraction.
BMC Bioinform., 2017

2016
Drug drug interaction extraction from biomedical literature using syntax convolutional neural network.
Bioinform., 2016

ML-CNN: A novel deep learning based disease named entity recognition architecture.
Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine, 2016

2015
Deep neural network based protein-protein interaction extraction from biomedical literature.
Proceedings of the 2015 IEEE International Conference on Bioinformatics and Biomedicine, 2015


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