Drawing Directed Graphs Using One-Dimensional Optimization. - Liran Carmel; David Harel; Yehuda Koren (GD, 2002)

ACE: A Fast Multiscale Eigenvectors Computation for Drawing Huge Graphs. - Yehuda Koren; Liran Carmel; David Harel (INFOVIS, 2002)

Visualization of Labeled Data Using Linear Transformations. - Yehuda Koren; Liran Carmel (INFOVIS, 2003)

Towards an odor communication system. - David Harel; Liran Carmel; Doron Lancet (Comput. Biol. Chem., 2003)

Drawing Huge Graphs by Algebraic Multigrid Optimization. - Yehuda Koren; Liran Carmel; David Harel (Multiscale Model. Simul., 2003)

Combining Hierarchy and Energy Drawing Directed Graphs. - Liran Carmel; David Harel; Yehuda Koren (IEEE Trans. Vis. Comput. Graph., 2004)

Robust Linear Dimensionality Reduction. - Yehuda Koren; Liran Carmel (IEEE Trans. Vis. Comput. Graph., 2004)

An Expectation-Maximization Algorithm for Analysis of Evolution of Exon-Intron Structure of Eukaryotic Genes. - Liran Carmel; Igor B. Rogozin; Yuri I. Wolf; Eugene V. Koonin (Comparative Genomics, 2005)

Predicting the Receptive Range of Olfactory Receptors. - Rafi Haddad; Liran Carmel; Noam Sobel; David Harel (PLoS Comput. Biol., 2008)

EREM: Parameter Estimation and Ancestral Reconstruction by Expectation-Maximization Algorithm for a Probabilistic Model of Genomic Binary Characters Evolution. - Liran Carmel; Yuri I. Wolf; Igor B. Rogozin; Eugene V. Koonin (Adv. Bioinformatics, 2010)

Dependencies among Editing Sites in Serotonin 2C Receptor mRNA. - Liran Carmel; Eugene V. Koonin; Stella Dracheva (PLoS Comput. Biol., 2012)

The role of nucleotide composition in premature termination codon recognition. - Fouad Zahdeh; Liran Carmel (BMC Bioinform., 2016)

JuncDB: an exon-exon junction database. - Michal Chorev; Lotem Guy; Liran Carmel (Nucleic Acids Res., 2016)

A deep neural network witharestricted noisy channel for identification of functional introns. - Alan Joseph Bekker; Michal Chorev; Liran Carmel; Jacob Goldberger (MLSP, 2017)

Gene ORGANizer: linking genes to the organs they affect. - David Gokhman; Guy Kelman; Adir Amartely; Guy Gershon; Shira Tsur; Liran Carmel (Nucleic Acids Res., 2017)

LINADMIX: evaluating the effect of ancient admixture events on modern populations. - Lily Agranat-Tamir; Shamam Waldman; Naomi Rosen; Benjamin Yakir; Shai Carmi; Liran Carmel (Bioinform., 2021)