Individual-level analysis of differential expression of genes and pathways for personalized medicine. - Hongwei Wang 003; Qiang Sun; Wenyuan Zhao; Lishuang Qi; Yunyan Gu; Pengfei Li 002; Mengmeng Zhang; Yang Li 023; Shu-Lin Liu; Zheng Guo 002 (Bioinform., 2015)

Critical limitations of prognostic signatures based on risk scores summarized from gene expression levels: a case study for resected stage I non-small-cell lung cancer. - Lishuang Qi; Libin Chen; Yang Li 023; Yuan Qin; Rufei Pan; Wenyuan Zhao; Yunyan Gu; Hongwei Wang 003; Ruiping Wang 002; Xiangqi Chen; Zheng Guo 002 (Briefings Bioinform., 2016)

Individualized identification of disease-associated pathways with disrupted coordination of gene expression. - Hongwei Wang 003; Hao Cai; Lu Ao; Haidan Yan; Wenyuan Zhao; Lishuang Qi; Yunyan Gu; Zheng Guo 002 (Briefings Bioinform., 2016)

A landscape of synthetic viable interactions in cancer. - Yunyan Gu; Ruiping Wang 002; Yue Han; Wenbin Zhou; Zhangxiang Zhao; Tingting Chen; Yuanyuan Zhang; Fuduan Peng; Haihai Liang; Lishuang Qi; Wenyuan Zhao; Da Yang 003; et al. (Briefings Bioinform., 2018)

Individualized analysis of differentially expressed miRNAs with application to the identification of miRNAs deregulated commonly in lung cancer tissues. - Haidan Yan; Hao Cai; Qingzhou Guan; Jun He; Juan Zhang; You Guo; Haiyan Huang; Xiangyu Li; Yawei Li; Yunyan Gu; Lishuang Qi; Zheng Guo 002 (Briefings Bioinform., 2018)

A rank-based algorithm of differential expression analysis for small cell line data with statistical control. - Xiangyu Li; Hao Cai; Xianlong Wang 002; Lu Ao; You Guo; Jun He; Yunyan Gu; Lishuang Qi; Qingzhou Guan; Xu Lin; Zheng Guo 002 (Briefings Bioinform., 2019)

Link synthetic lethality to drug sensitivity of cancer cells. - Ruiping Wang 002; Yue Han; Zhangxiang Zhao; Fan Yang; Tingting Chen; Wenbin Zhou; Xianlong Wang 002; Lishuang Qi; Wenyuan Zhao; Zheng Guo 002; Yunyan Gu (Briefings Bioinform., 2019)

Reference genome and annotation updates lead to contradictory prognostic predictions in gene expression signatures: a case study of resected stage I lung adenocarcinoma. - Zheyang Zhang; Sainan Zhang; Xin Li; Zhangxiang Zhao; Changjing Chen; Juxuan Zhang; Mengyue Li; Zixin Wei; Wenbin Jiang 008; Bo Pan; Ying Li 028; Yixin Liu; et al. (Briefings Bioinform., 2021)

An absolute human stemness index associated with oncogenic dedifferentiation. - Hailong Zheng; Kai Song; Yelin Fu; Tianyi You; Jing Yang; Wenbing Guo; Kai Wang; Liangliang Jin; Yunyan Gu; Lishuang Qi; Wenyuan Zhao (Briefings Bioinform., 2021)