New filter-based feature selection criteria for identifying differentially expressed genes. - Lit-Hsin Loo; Samuel Roberts; Leonid Hrebien; Moshe Kam (ICMLA, 2005)

Automated multivariate profiling of drug effects from fluorescence microscopy images. - Lit-Hsin Loo; Lani F. Wu; Steven J. Altschuler (ISBI, 2006)

cellXpress: a fast and user-friendly software platform for profiling cellular phenotypes. - Danai Laksameethanasan; Rui Tan; Geraldine Toh; Lit-Hsin Loo (BMC Bioinform., 2013)

Supervised prediction of drug-induced nephrotoxicity based on interleukin-6 and -8 expression levels. - Ran Su; Yao Li; Daniele Zink; Lit-Hsin Loo (BMC Bioinform., 2014)

Quantitative Protein Localization Signatures Reveal an Association between Spatial and Functional Divergences of Proteins. - Lit-Hsin Loo; Danai Laksameethanasan; Yi-Ling Tung (PLoS Comput. Biol., 2014)

A Foundation Model for Spatial Proteomics. - Muhammad Shaban; Yuzhou Chang; Huaying Qiu; Yao Yu Yeo; Andrew H. Song; Guillaume Jaume; Yuchen Wang; Luca L. Weishaupt; Tong Ding; Anurag Vaidya; Abdallah Lamane; Daniel Shao; et al. (CoRR, 2025)