TIMMA-R: an R package for predicting synergistic multi-targeted drug combinations in cancer cell lines or patient-derived samples. - Liye He; Krister Wennerberg; Tero Aittokallio; Jing Tang 002 (Bioinform., 2015)

SynergyFinder: a web application for analyzing drug combination dose-response matrix data. - Aleksandr Ianevski; Liye He; Tero Aittokallio; Jing Tang 002 (Bioinform., 2020)

Computational tools for high-throughput drug combination screening, synergy scoring and predictive modelling in cancer. - Liye He (2020)

Network-guided identification of cancer-selective combinatorial therapies in ovarian cancer. - Liye He; Daria Bulanova; Jaana Oikkonen; Antti Häkkinen; Kaiyang Zhang; Shuyu Zheng; Wenyu Wang; Erdogan Pekcan Erkan; Olli Carpén; Titta Joutsiniemi; Sakari Hietanen; Johanna Hynninen; et al. (Briefings Bioinform., 2021)

Characterizing the Quality of Insight by Interactions: A Case Study. - Chen He 003; Luana Micallef; Liye He; Gopal Peddinti; Tero Aittokallio; Giulio Jacucci (IEEE Trans. Vis. Comput. Graph., 2021)