idse-HE: Hybrid embedding graph neural network for drug side effects prediction. - Liyi Yu; Meiling Cheng; Wangren Qiu; Xuan Xiao; Weizhong Lin (J. Biomed. Informatics, 2022)

HGDTI: predicting drug-target interaction by using information aggregation based on heterogeneous graph neural network. - Liyi Yu; Wangren Qiu; Weizhong Lin; Xiang Cheng; Xuan Xiao; Jiexia Dai (BMC Bioinform., 2022)

MSDSE: Predicting drug-side effects based on multi-scale features and deep multi-structure neural network. - Liyi Yu; Zhaochun Xu; Wangren Qiu; Xuan Xiao (Comput. Biol. Medicine, 2024)

Real-Time Caustic Ratio Prediction in Alumina Digestion Process for Closed-Loop Operation: A Cloud-Edge Deep Learning Approach. - Liyi Yu; Wen Yu 001; Yao Jia 001; Tianyou Chai (IEEE Trans Autom. Sci. Eng., 2025)

Deep Learning Framework for Collaborative Variable Time Delay Estimation and Uncertainty Quantification in Industrial Quality Prediction. - Liyi Yu; Wen Yu 001; Yao Jia 001; Tianyou Chai (IEEE Trans. Ind. Informatics, 2025)