Dissecting the biological relationship between TCGA miRNA and mRNA sequencing data using MMiRNA-Viewer. - Yongsheng Bai; Lizhong Ding 002; Steve Baker; Jenny M. Bai; Ethan Rath; Feng Jiang; Jianghong Wu; Hui Jiang 002; Gary W. Stuart (BMC Bioinform., 2016)

Identification of genome-wide non-canonical spliced regions and analysis of biological functions for spliced sequences using Read-Split-Fly. - Yongsheng Bai; Jeff Kinne; Lizhong Ding 002; Ethan Rath; Aaron Cox; Siva Dharman Naidu (BMC Bioinform., 2017)

MMiRNA-Viewer2, a bioinformatics tool for visualizing functional annotation for MiRNA and MRNA pairs in a network. - Yongsheng Bai; Steve Baker; Kevin Exoo; Xingqin Dai; Lizhong Ding 002; Naureen Aslam Khattak; Hongtao Li; Hannah Liu; Xiaoming Liu (BMC Bioinform., 2020)