Interpreting functional effects of coding variants: challenges in proteome-scale prediction, annotation and assessment. - Khader Shameer; Lokesh P. Tripathi; Krishna R. Kalari; Joel T. Dudley; Ramanathan Sowdhamini (Briefings Bioinform., 2016)

An integrative data analysis platform for gene set analysis and knowledge discovery in a data warehouse framework. - Yi-An Chen; Lokesh P. Tripathi; Kenji Mizuguchi (Database J. Biol. Databases Curation, 2016)

CLINE: a web-tool for the comparison of biological dendrogram structures. - Rodolfo S. Allendes Osorio; Lokesh P. Tripathi; Kenji Mizuguchi (BMC Bioinform., 2019)

Network-Based Analysis for Biological Discovery. - Lokesh P. Tripathi; Yi-An Chen; Kenji Mizuguchi; Yoichi Murakami (Encyclopedia of Bioinformatics and Computational Biology (3), 2019)

Network-Based Analysis of Host-Pathogen Interactions. - Lokesh P. Tripathi; Yi-An Chen; Kenji Mizuguchi; Eiji Morita (Encyclopedia of Bioinformatics and Computational Biology (3), 2019)

Integrative Analysis of Multi-Omics Data. - Lokesh P. Tripathi; Tsuyoshi Esaki; Mari N. Itoh; Yi-An Chen; Kenji Mizuguchi (Encyclopedia of Bioinformatics and Computational Biology (3), 2019)

Integrative Network Modeling Highlights the Crucial Roles of Rho-GDI Signaling Pathway in the Progression of non-Small Cell Lung Cancer. - Saransh Gupta; Haswanth Vundavilli; Rodolfo S. Allendes Osorio; Mari N. Itoh; Attayeb Mohsen; Aniruddha Datta; Kenji Mizuguchi; Lokesh P. Tripathi (IEEE J. Biomed. Health Informatics, 2022)