Identification of Shortened 3′ untranslated Regions from Expression Arrays. - Loredana Martignetti; Andrei Yu. Zinovyev; Emmanuel Barillot (J. Bioinform. Comput. Biol., 2012)

Mathematical Modelling of Molecular Pathways Enabling Tumour Cell Invasion and Migration. - David P. A. Cohen; Loredana Martignetti; Sylvie Robine; Emmanuel Barillot; Andrei Yu. Zinovyev; Laurence Calzone (PLoS Comput. Biol., 2015)

Conceptual and computational framework for logical modelling of biological networks deregulated in diseases. - Arnau Montagud; Pauline Traynard; Loredana Martignetti; Eric Bonnet; Emmanuel Barillot; Andrei Yu. Zinovyev; Laurence Calzone (Briefings Bioinform., 2019)

MiREx: mRNA levels prediction from gene sequence and miRNA target knowledge. - Elena Pianfetti; Marta Lovino; Elisa Ficarra; Loredana Martignetti (BMC Bioinform., 2023)