Computational identification of transcription factor binding sites by functional analysis of sets of genes sharing overrep-resented upstream motifs. - Davide Corà; Ferdinando Di Cunto; Paolo Provero; Lorenzo Silengo; Michele Caselle (BMC Bioinform., 2004)

CLOE: Identification of putative functional relationships among genes by comparison of expression profiles between two species. - Maurizio Pellegrino; Paolo Provero; Lorenzo Silengo; Ferdinando Di Cunto (BMC Bioinform., 2004)

Prediction of Human Disease Genes by Human-Mouse Conserved Coexpression Analysis. - Ugo Ala; Rosario Michael Piro; Elena Grassi; Christian Damasco; Lorenzo Silengo; Martin Oti; Paolo Provero; Ferdinando Di Cunto (PLoS Comput. Biol., 2008)