Propagating annotations of molecular networks using in silico fragmentation. - Ricardo Roberto da Silva; Mingxun Wang 001; Louis-Félix Nothias; Justin J. J. van der Hooft; Andrés Mauricio Caraballo-Rodríguez; Evan Fox; Marcy J. Balunas; Jonathan L. Klassen; Norberto Peporine Lopes; Pieter C. Dorrestein (PLoS Comput. Biol., 2018)

Database-independent molecular formula annotation using Gibbs sampling through ZODIAC. - Marcus Ludwig; Louis-Félix Nothias; Kai Dührkop; Irina Koester; Markus Fleischauer; Martin A. Hoffmann; Daniel Petras; Fernando Vargas; Mustafa Morsy; Lihini Aluwihare; Pieter C. Dorrestein; Sebastian Böcker (Nat. Mach. Intell., 2020)

Publisher Correction: Database-independent molecular formula annotation using Gibbs sampling through ZODIAC. - Marcus Ludwig; Louis-Félix Nothias; Kai Dührkop; Irina Koester; Markus Fleischauer; Martin A. Hoffmann; Daniel Petras; Fernando Vargas; Mustafa Morsy; Lihini Aluwihare; Pieter C. Dorrestein; Sebastian Böcker (Nat. Mach. Intell., 2020)

MS2Planner: improved fragmentation spectra coverage in untargeted mass spectrometry by iterative optimized data acquisition. - Zeyuan Zuo; Liu Cao; Louis-Félix Nothias; Hosein Mohimani (Bioinform., 2021)

MEMO: Mass Spectrometry-Based Sample Vectorization to Explore Chemodiverse Datasets. - Arnaud Gaudry; Florian Huber; Louis-Félix Nothias; Sylvian Cretton; Marcel Kaiser; Jean-Luc Wolfender; Pierre-Marie Allard (Frontiers Bioinform., 2022)

DeepSAT: Learning Molecular Structures from Nuclear Magnetic Resonance Data. - Hyun Woo Kim; Chen Zhang 022; Raphael Reher; Mingxun Wang 001; Kelsey L. Alexander; Louis-Félix Nothias; Yoo Kyong Han; Hyeji Shin; Ki Yong Lee; Kyu Hyeong Lee; Myeong Ji Kim; Pieter C. Dorrestein; et al. (J. Cheminformatics, 2023)

Application of the RDF framework to integrate heterogenous experimental data of a large chemo- and biodiverse collection from a collaborative research project. - Frédéric Burdet; Luis-Manuel Quiros-Guerrero; Olivier Kirchhoffer; Jahn Nitschke; Pierre-Marie Allard; Louis-Félix Nothias; Arnaud Gaudry; Sébastien Moretti; Robin Engler; Emerson Ferreira Queiroz; Nabil Hanna; Chunyan Wu; et al. (SWAT4HCLS, 2024)

Q2Forge: Minting Competency Questions and SPARQL Queries for Question-Answering Over Knowledge Graphs. - Yousouf Taghzouti; Franck Michel; Tao Jiang; Louis-Félix Nothias; Fabien Gandon (CoRR, 2025)