Predicting clone genotypes from tumor bulk sequencing of multiple samples. - Sayaka Miura; Karen Gomez; Oscar D. Murillo; Louise A. Huuki; Tracy Vu; Tiffany Buturla; Sudhir Kumar 001 (Bioinform., 2018)

Computational enhancement of single-cell sequences for inferring tumor evolution. - Sayaka Miura; Louise A. Huuki; Tiffany Buturla; Tracy Vu; Karen Gomez; Sudhir Kumar 001 (Bioinform., 2018)

A new method for inferring timetrees from temporally sampled molecular sequences. - Sayaka Miura; Koichiro Tamura; Qiqing Tao; Louise A. Huuki; Sergei L. Kosakovsky Pond; Jessica Priest; Jiamin Deng; Sudhir Kumar 001 (PLoS Comput. Biol., 2020)

Discovering research articles containing evolutionary timetrees by machine learning. - Marija Stanojevic; Jovan Andjelkovic; Adrienne Kasprowicz; Louise A. Huuki; Jennifer Chao; S. Blair Hedges; Sudhir Kumar 001; Zoran Obradovic (Bioinform., 2023)