Force field development for cofactors in the photosystem II. - Lu Zhang 079; Daniel-Adriano Silva; YiJing Yan; Xuhui Huang (J. Comput. Chem., 2012)

Structural Model of RNA Polymerase II Elongation Complex with Complete Transcription Bubble Reveals NTP Entry Routes. - Lu Zhang 079; Daniel-Adriano Silva; Fátima Pardo Avila; Dong Wang; Xuhui Huang (PLoS Comput. Biol., 2015)

Massively parallel de novo protein design for targeted therapeutics. - Aaron Chevalier; Daniel-Adriano Silva; Gabriel J. Rocklin; Derrick R. Hicks; Renan Vergara; Patience Murapa; Steffen M. Bernard; Lu Zhang 079; Kwok-Ho Lam; Guorui Yao; Christopher D. Bahl; Shin-Ichiro Miyashita; et al. (Nat., 2017)

Rational designing of 8-hydroxyquinolin-imidazolinone-based fluorescent protein mutants with dramatically red shifted emission: A computational study. - Xian Chen; Jian Song; Zhe-Ning Chen; Tan Jin; Fengqin Long; Hua Xie; Yisong Zheng; Wei Zhuang; Lu Zhang 079 (J. Comput. Chem., 2018)

AB-Gen: Antibody Library Design with Generative Pre-Trained Transformer and Deep Reinforcement Learning. - Xiaopeng Xu; Tiantian Xu; Juexiao Zhou; Xingyu Liao; Ruochi Zhang; Yu Wang 225; Lu Zhang 079; Xin Gao 001 (Genom. Proteom. Bioinform., 2023)