BiTeM at CLEF eHealth Evaluation Lab 2016 Task 2: Multilingual Information Extraction. - Luc Mottin; Julien Gobeill; Anaïs Mottaz; Emilie Pasche; Arnaud Gaudinat; Patrick Ruch (CLEF (Working Notes), 2016)

neXtA5: accelerating annotation of articles via automated approaches in neXtProt. - Luc Mottin; Julien Gobeill; Emilie Pasche; Pierre-André Michel; Isabelle Cusin; Pascale Gaudet; Patrick Ruch (Database J. Biol. Databases Curation, 2016)

Customizing a Variant Annotation-Support Tool: an Inquiry into Probability Ranking Principles for TREC Precision Medicine. - Emilie Pasche; Julien Gobeill; Luc Mottin; Anaïs Mottaz; Douglas Teodoro; Paul Van Rijen; Patrick Ruch (TREC, 2017)

Triage by ranking to support the curation of protein interactions. - Luc Mottin; Emilie Pasche; Julien Gobeill; Valentine Rech de Laval; Anne Gleizes; Pierre-André Michel; Amos Bairoch; Pascale Gaudet; Patrick Ruch (Database J. Biol. Databases Curation, 2017)

Improving average ranking precision in user searches for biomedical research datasets. - Douglas Teodoro; Luc Mottin; Julien Gobeill; Arnaud Gaudinat; Thérèse Vachon; Patrick Ruch (Database J. Biol. Databases Curation, 2017)

Accelerating annotation of articles via automated approaches: evaluation of the neXtA5 curation-support tool by neXtProt. - Aurore Britan; Isabelle Cusin; Valérie Hinard; Luc Mottin; Emilie Pasche; Julien Gobeill; Valentine Rech de Laval; Anne Gleizes; Daniel Dinis Teixeira; Pierre-André Michel; Patrick Ruch; Pascale Gaudet (Database J. Biol. Databases Curation, 2018)

A Data-Driven Approach for Measuring the Severity of the Signs of Depression using Reddit Posts. - Paul Van Rijen; Douglas Teodoro; Nona Naderi; Luc Mottin; Julien Knafou; Matt Jeffryes; Patrick Ruch (CLEF (Working Notes), 2019)

Designing retrieval models to contrast precision-driven ad hoc search vs. recall-driven treatment extraction in Precision Medicine. - Déborah Caucheteur; Emilie Pasche; Julien Gobeill; Anaïs Mottaz; Luc Mottin; Patrick Ruch (TREC, 2019)

SIB Text Mining at TREC 2019 Deep Learning Track: Working Note. - Julien Knafou; Matt Jeffryes; Luc Mottin; Douglas Teodoro; Patrick Ruch (TREC, 2019)

Text-Mining Services of the Swiss Variant Interpretation Platform for Oncology. - Déborah Caucheteur; Julien Gobeill; Anaïs Mottaz; Emilie Pasche; Pierre-André Michel; Luc Mottin; Daniel J. Stekhoven; Valérie Barbié; Patrick Ruch (MIE, 2020)

SIB Text Mining at TREC Precision Medicine 2020. - Emilie Pasche; Déborah Caucheteur; Luc Mottin; Anaïs Mottaz; Julien Gobeill; Patrick Ruch (TREC, 2020)

SIB Literature Services: RESTful customizable search engines in biomedical literature, enriched with automatically mapped biomedical concepts. - Julien Gobeill; Déborah Caucheteur; Pierre-André Michel; Luc Mottin; Emilie Pasche; Patrick Ruch (Nucleic Acids Res., 2020)

SIB Text Mining at TREC Clinical Trials 2021. - Déborah Caucheteur; Emilie Pasche; Luc Mottin; Anaïs Mottaz; Julien Gobeill; Patrick Ruch (TREC, 2021)

Classification of oncology treatment responses from radiology reports with supervised machine learning. - Luc Mottin; Jean-Philippe Goldman; Christoph Jäggli; Rita Achermann; Julien Gobeill; Julien Knafou; Julien Ehrsam; Alexandre Wicky; Camille L. Gerard; Tanja Schwenk; Mélinda Charrier; Petros Tsantoulis; et al. (AMIA, 2022)

Classification of Oncology Treatment Responses from French Radiology Reports with Supervised Machine Learning. - Jean-Philippe Goldman; Luc Mottin; Jamil Zaghir; Daniel Keszthelyi; Belinda Lokaj; Hugues Turbé; Julien Gobeill; Patrick Ruch; Julien Ehrsam; Christian Lovis (MIE, 2022)

Designing an Optimal Expansion Method to Improve the Recall of a Genomic Variant Curation-Support Service. - Anaïs Mottaz; Emilie Pasche; Pierre-André Michel; Luc Mottin; Douglas Teodoro; Patrick Ruch (MIE, 2022)

COVoc and COVTriage: novel resources to support literature triage. - Déborah Caucheteur; Zoë May Pendlington; Paola Roncaglia; Julien Gobeill; Luc Mottin; Nicolas Matentzoglu; Donat Agosti; David Osumi-Sutherland; Helen E. Parkinson; Patrick Ruch (Bioinform., 2023)

Multilingual RECIST classification of radiology reports using supervised learning. - Luc Mottin; Jean-Philippe Goldman; Christoph Jäggli; Rita Achermann; Julien Gobeill; Julien Knafou; Julien Ehrsam; Alexandre Wicky; Camille L. Gerard; Tanja Schwenk; Mélinda Charrier; Petros Tsantoulis; et al. (Frontiers Digit. Health, 2023)

Comparing Sequence-Based and Literature-Based Pathogenicity Scoring Methods for Human Variants. - Luc Mottin; Nona Naderi; Anaïs Mottaz; Pierre-André Michel; Lennart F. Johansson; Morris A. Swertz; Andrew Stubbs; Emilie Pasche; Julien Gobeill; Patrick Ruch (MIE, 2024)