Approximate Pattern Matching Using Search Schemes and In-Text Verification. - Luca Renders; Lore Depuydt; Jan Fostier (IWBBIO (2), 2022)

Pan-genome de Bruijn graph using the bidirectional FM-index. - Lore Depuydt; Luca Renders; Thomas Abeel; Jan Fostier (BMC Bioinform., 2023)

Automated Design of Efficient Search Schemes for Lossless Approximate Pattern Matching. - Luca Renders; Lore Depuydt; Sven Rahmann; Jan Fostier (RECOMB, 2024)

b-move: Faster Bidirectional Character Extensions in a Run-Length Compressed Index. - Lore Depuydt; Luca Renders; Simon Van de Vyver; Lennart Veys; Travis Gagie; Jan Fostier (WABI, 2024)

Lossless Approximate Pattern Matching: Automated Design of Efficient Search Schemes. - Luca Renders; Lore Depuydt; Sven Rahmann; Jan Fostier (J. Comput. Biol., 2024)

Search Schemes for Approximate Pattern Matching: An Overview. - Lore Depuydt; Jan Fostier; Simon Gottlieb; Gregory Kucherov; Knut Reinert; Luca Renders (The Expanding World of Compressed Data, 2025)

b-move: faster lossless approximate pattern matching in a run-length compressed index. - Lore Depuydt; Luca Renders; Simon Van de Vyver; Lennart Veys; Travis Gagie; Jan Fostier (Algorithms Mol. Biol., 2025)