IonRock: software for solving strain gradients of ion-implanted semiconductors by X-ray diffraction measurements and evolutionary programming. - Lucas Bleicher; José Marcos Sasaki; Renata Villela Orloski; Lisandro Pavie Cardoso; Marcelo Assaoka Hayashi; Jacobus Willibrordus Swart (Comput. Phys. Commun., 2004)

PFstats: A Network-Based Open Tool for Protein Family Analysis. - Néli J. Fonseca-Júnior; Marcelo Q. L. Afonso; Lucas Carrijo de Oliveira; Lucas Bleicher (J. Comput. Biol., 2018)

A new method bridging graph theory and residue co-evolutionary networks for specificity determinant positions detection. - Néli José da Fonseca Jr.; Marcelo Querino Lima Afonso; Lucas Carrijo de Oliveira; Lucas Bleicher (Bioinform., 2019)

Coevolved Positions Represent Key Functional Properties in the Trypsin-Like Serine Proteases Protein Family. - Marcelo Querino Lima Afonso; Néli José da Fonseca Jr.; Lucas Carrijo de Oliveira; Francisco Pereira Lobo; Lucas Bleicher (J. Chem. Inf. Model., 2020)

CEvADA: Co-Evolution Analysis Data Archive. - Néli J. Fonseca-Júnior; Marcelo Querino Lima Afonso; Lucas Bleicher (BSB, 2021)

CONAN: a web application to detect specificity determinants and functional sites by amino acids co-variation network analysis. - Néli J. Fonseca-Júnior; Marcelo Q. L. Afonso; Lucas Carrijo de Oliveira; Lucas Bleicher (Bioinform., 2021)

Naview: A d3.js Based JavaScript Library for Drawing and Annotating Voltage-Gated Sodium Channels Membrane Diagrams. - Marcelo Querino Lima Afonso; Néli José da Fonseca Jr.; Thainá Godinho Miranda; Lucas Bleicher (Frontiers Bioinform., 2022)

Characterization of an Allosteric Pocket in Zika Virus NS2B-NS3 Protease. - Naiá Porã Santos; Lucianna Helene Santos; Mariana Torquato Quezado de Magalhães; Jian Lei; Rolf Hilgenfeld; Rafaela Salgado Ferreira; Lucas Bleicher (J. Chem. Inf. Model., 2022)

Prediction of enzymatic function with high efficiency and a reduced number of features using genetic algorithm. - Diogo Rodrigo dos Reis; Bruno César dos Santos; Lucas Bleicher; Luis E. Zárate; Cristiane Neri Nobre (Comput. Biol. Medicine, 2023)