Algebraic geometry of Bayesian networks. - Luis David García-Puente; Michael Eugene Stillman; Bernd Sturmfels (J. Symb. Comput., 2005)

Sequential dynamical systems over words. - Luis David García-Puente; Abdul Salam Jarrah; Reinhard C. Laubenbacher (Appl. Math. Comput., 2006)

Some Geometrical Aspects of Control Points for Toric Patches. - Gheorghe Craciun; Luis David García-Puente; Frank Sottile (MMCS, 2008)

Linear precision for parametric patches. - Luis David García-Puente; Frank Sottile (Adv. Comput. Math., 2010)

Parameter estimation for Boolean models of biological networks. - Elena S. Dimitrova; Luis David García-Puente; Franziska Hinkelmann; Abdul Salam Jarrah; Reinhard C. Laubenbacher; Brandilyn Stigler; Michael Eugene Stillman; Paola Vera-Licona (Theor. Comput. Sci., 2011)

Toric degenerations of Bézier patches. - Luis David García-Puente; Frank Sottile; Chungang Zhu (ACM Trans. Graph., 2011)

The Secant Conjecture in the Real Schubert Calculus. - Luis David García-Puente; Nickolas Hein; Christopher J. Hillar; Abraham Martín del Campo; James Ruffo; Frank Sottile; Zach Teitler (Exp. Math., 2012)

Algebraic and combinatorial aspects of sandpile monoids on directed graphs. - Scott Chapman; Rebecca Garcia; Luis David García-Puente; Martin E. Malandro; Ken W. Smith (J. Comb. Theory A, 2013)

An Algebra-Based Method for Inferring Gene Regulatory Networks. - Paola Vera-Licona; Abdul Salam Jarrah; Luis David García-Puente; John McGee; Reinhard C. Laubenbacher (BMC Syst. Biol., 2014)

Neural Ideals in SageMath. - Ethan Petersen; Nora Youngs; Ryan Kruse; Dane Miyata; Rebecca Garcia; Luis David García-Puente (ICMS, 2018)

Counting arithmetical structures on paths and cycles. - Benjamin Braun; Hugo Corrales; Scott Corry; Luis David García-Puente; Darren B. Glass; Nathan Kaplan; Jeremy L. Martin; Gregg Musiker; Carlos E. Valencia (Discret. Math., 2018)

Gröbner bases of neural ideals. - Rebecca Garcia; Luis David García-Puente; Ryan Kruse; Jessica Liu; Dane Miyata; Ethan Petersen; Kaitlyn Phillipson; Anne Shiu (Int. J. Algebra Comput., 2018)

Arithmetical structures on bidents. - Kassie Archer; Abigail C. Bishop; Alexander Diaz-Lopez; Luis David García-Puente; Darren B. Glass; Joel Louwsma (Discret. Math., 2020)

The sandpile group of a thick cycle graph. - Diane Christine Alar; Jonathan Celaya; Luis David García-Puente; Micah Henson; Ashley K. Wheeler (Electron. J. Graph Theory Appl., 2022)

Absolute concentration robustness: Algebra and geometry. - Luis David García-Puente; Elizabeth Gross; Heather A. Harrington; Matthew D. Johnston; Nicolette Meshkat; Mercedes Pérez Millán; Anne Shiu (J. Symb. Comput., 2025)