Luis M. Rocha

Orcid: 0000-0001-9402-887X

Affiliations:
  • Indiana University, Bloomington, IN, USA


According to our database1, Luis M. Rocha authored at least 71 papers between 1995 and 2024.

Collaborative distances:
  • Dijkstra number2 of four.
  • Erdős number3 of four.

Timeline

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Bibliography

2024
The ultrametric backbone is the union of all minimum spanning forests.
CoRR, 2024

2023
Contact networks have small metric backbones that maintain community structure and are primary transmission subgraphs.
PLoS Comput. Biol., February, 2023

Effective Connectivity and Bias Entropy Improve Prediction of Dynamical Regime in Automata Networks.
Entropy, February, 2023

Semi-metric topology characterizes epidemic spreading on complex networks.
CoRR, 2023

Dynamical Modularity in Automata Models of Biochemical Networks.
CoRR, 2023

Understanding Contexts and Challenges of Information Management for Epilepsy Care.
Proceedings of the 2023 CHI Conference on Human Factors in Computing Systems, 2023

2022
Small Cohort of Epilepsy Patients Showed Increased Activity on Facebook before Sudden Unexpected Death.
CoRR, 2022

On the feasibility of dynamical analysis of network models of biochemical regulation.
Bioinform., 2022

Translational drug-interaction corpus.
Database J. Biol. Databases Curation, 2022

The Distance Backbone of Directed Networks.
Proceedings of the Complex Networks and Their Applications XI, 2022

2021
Introduction to the special issue on COMPLEX NETWORKS 2019.
Netw. Sci., October, 2021

Just In Time: Challenges and Opportunities of First Aid Care Information Sharing for Supporting Epileptic Seizure Response.
Proc. ACM Hum. Comput. Interact., 2021

The distance backbone of complex networks.
J. Complex Networks, 2021

2020
Introduction to the special issue on COMPLEX NETWORKS 2018.
Netw. Sci., 2020

Mining social media data for biomedical signals and health-related behavior.
CoRR, 2020

2019
City-wide electronic health records reveal gender and age biases in administration of known drug-drug interactions.
npj Digit. Medicine, 2019

2018
CANA: A python package for quantifying control and canalization in Boolean Networks.
CoRR, 2018

City-wide Analysis of Electronic Health Records Reveals Gender and Age Biases in the Administration of Known Drug-Drug Interactions.
CoRR, 2018

2017
Human Sexual Cycles are Driven by Culture and Match Collective Moods.
CoRR, 2017

2016
Monitoring Potential Drug Interactions and Reactions via Network Analysis of Instagram User Timelines.
Proceedings of the Biocomputing 2016: Proceedings of the Pacific Symposium, 2016

2015
Distance closures on complex networks.
Netw. Sci., 2015

Modularity and the Spread of Perturbations in Complex Dynamical Systems.
CoRR, 2015

Control of complex networks requires both structure and dynamics.
CoRR, 2015

Computational fact checking from knowledge networks.
CoRR, 2015

2014
Multi-scale integration and predictability in resting state brain activity.
Frontiers Neuroinformatics, 2014

Extraction of Pharmacokinetic Evidence of Drug-drug Interactions from the Literature.
CoRR, 2014

Structure and Dynamics Affect the Controlability of Complex Systems: A Preliminary Study.
Proceedings of the Fourteenth International Conference on the Simulation and Synthesis of Living Systems, 2014

Designing a Minimalist Socially Aware Robotic Agent for the Home.
Proceedings of the Fourteenth International Conference on the Simulation and Synthesis of Living Systems, 2014

2013
Canalization and control in automata networks: body segmentation in Drosophila melanogaster
CoRR, 2013

An integrated pharmacokinetics ontology and corpus for text mining.
BMC Bioinform., 2013

Evaluation of Linear Classifiers on Articles Containing Pharmacokinetic Evidence of Drug-Drug Interactions.
Proceedings of the Biocomputing 2013: Proceedings of the Pacific Symposium, 2013

2012
Correction: A linear classifier based on entity recognition tools and a statistical approach to method extraction in the protein-protein interaction literature.
BMC Bioinform., 2012

Semi-metric Networks for Recommender Systems.
Proceedings of the 2012 IEEE/WIC/ACM International Conferences on Web Intelligence and Intelligent Agent Technology, 2012

2011
Collective classification of textual documents by guided self-organization in T-Cell cross-regulation dynamics.
Evol. Intell., 2011

A linear classifier based on entity recognition tools and a statistical approach to method extraction in the protein-protein interaction literature.
BMC Bioinform., 2011

The Protein-Protein Interaction tasks of BioCreative III: classification/ranking of articles and linking bio-ontology concepts to full text.
BMC Bioinform., 2011

Schema redescription in cellular automata: Revisiting emergence in complex systems.
Proceedings of the 2011 IEEE Symposium on Artificial Life, 2011

Prediction and modularity in dynamical systems.
Proceedings of the Advances in Artificial Life: 20th Anniversary Edition, 2011

2010
Classification of Protein-Protein Interaction Full-Text Documents Using Text and Citation Network Features.
IEEE ACM Trans. Comput. Biol. Bioinform., 2010

BioDR: Semantic indexing networks for biomedical document retrieval.
Expert Syst. Appl., 2010

Biomedical Article Classification Using an Agent-Based Model of T-Cell Cross-Regulation.
Proceedings of the Artificial Immune Systems, 9th International Conference, 2010

Collective Classification of Biomedical Articles using T-Cell Cross-regulation.
Proceedings of the Twelfth International Conference on the Synthesis and Simulation of Living Systems, 2010

2009
Literature mining on pharmacokinetics numerical data: A feasibility study.
J. Biomed. Informatics, 2009

Biomedical Text Mining Applied to Document Retrieval and Semantic Indexing.
Proceedings of the Distributed Computing, 2009

2008
Uncovering protein interaction in abstracts and text using a novel linear model and word proximity networks
CoRR, 2008

The Role of Conceptual Structure in Designing Cellular Automata to Perform Collective Computation.
Proceedings of the Unconventional Computing, 7th International Conference, 2008

Adaptive Spam Detection Inspired by a Cross-Regulation Model of Immune Dynamics: A Study of Concept Drift.
Proceedings of the Artificial Immune Systems, 7th International Conference, 2008

Conceptual Structure in Cellular Automata - The Density Classification Task.
Proceedings of the Eleventh International Conference on the Synthesis and Simulation of Living Systems, 2008

Adaptive Spam Detection Inspired by the Immune System.
Proceedings of the Eleventh International Conference on the Synthesis and Simulation of Living Systems, 2008

2007
Agent-Based Model of Genotype Editing.
Evol. Comput., 2007

Genotype Editing and the Evolution of Regulation and Memory.
Proceedings of the Advances in Artificial Life, 9th European Conference, 2007

2006
Large-Scale Testing of Bibliome Informatics Using Pfam Protein Families.
Proceedings of the Biocomputing 2006, 2006

2005
Protein annotation as term categorization in the gene ontology using word proximity networks.
BMC Bioinform., 2005

Material Representations: From the Genetic Code to the Evolution of Cellular Automata.
Artif. Life, 2005

Introduction to the Special Issue: Embodied and Situated Cognition.
Artif. Life, 2005

MyLibrary@LANL: Proximity and Semi-metric Networks for a Collaborative and Recommender Web Service.
Proceedings of the 2005 IEEE / WIC / ACM International Conference on Web Intelligence (WI 2005), 2005

Tracking extrema in dynamic environments using a coevolutionary agent-based model of genotype edition.
Proceedings of the Genetic and Evolutionary Computation Conference, 2005

2004
Study and analysis of workspace awareness in CDebate: a groupware application for collaborative debates.
Interact. Comput., 2004

Using the APRI model for evaluating the intention in collaborative learning environments.
Inteligencia Artif., 2004

Optimization Algorithm for Dynamic Multi-Agent Job Routing.
Proceedings of the Emerging Solutions for Future Manufacturing Systems, 2004

A Systematic Study of Genetic Algorithms with Genotype Editing.
Proceedings of the Genetic and Evolutionary Computation, 2004

2003
Semi-metric Behavior in Document Networks and its Application to Recommendation Systems
CoRR, 2003

Exploration of RNA editing and design of robust genetic algorithms.
Proceedings of the IEEE Congress on Evolutionary Computation, 2003

2002
Combination of evidence in recommendation systems characterized by distance functions.
Proceedings of the 2002 IEEE International Conference on Fuzzy Systems, 2002

2000
Biologically Motivated Distributed Designs for Adaptive Knowledge Management
CoRR, 2000

Syntactic Autonomy: Why There is no Autonomy without Symbols and How Self-Organization Might Evolve Them
CoRR, 2000

An Adaptive Systems Approach to the Implementation and Evaluation of Digital Library Recommendation Systems.
Proceedings of the Research and Advanced Technology for Digital Libraries, 2000

1999
<i>TalkMine</i> and the Adaptive Recommendation Project.
Proceedings of the Fourth ACM conference on Digital Libraries, 1999

Mining Associative Relations from Website Logs and their Application to Context-Dependent Retrieval Using Spreading Activation.
Proceedings of the 1999 ACM Digital Library Workshop on Organizing Web Space (WOWS), 1999

1998
Towards a Formal Taxonomy of Hybrid Uncertainty Representations.
Inf. Sci., 1998

1995
Contextual Genetic Algorithms: Evolving Developmental Rules.
Proceedings of the Advances in Artificial Life, 1995


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