A network-based approach for predicting key enzymes explaining metabolite abundance alterations in a disease phenotype. - Jon Pey; Luis Tobalina; Joaquín Prada J. de Cisneros; Francisco J. Planes (BMC Syst. Biol., 2013)

Advances in network-based metabolic pathway analysis and gene expression data integration. - Alberto Rezola; Jon Pey; Luis Tobalina; Ángel Rubio; John E. Beasley; Francisco J. Planes (Briefings Bioinform., 2015)

TreeEFM: calculating elementary flux modes using linear optimization in a tree-based algorithm. - Jon Pey; Juan A. Villar; Luis Tobalina; Alberto Rezola; José Manuel García Carrasco; John E. Beasley; Francisco J. Planes (Bioinform., 2015)

Context-specific metabolic network reconstruction of a naphthalene-degrading bacterial community guided by metaproteomic data. - Luis Tobalina; Rafael Bargiela; Jon Pey; Florian-Alexander Herbst; Iván Lores; David Rojo; Coral Barbas; Ana I. Peláez; Jesús Sánchez; Martin von Bergen; Jana Seifert; Manuel Ferrer; et al. (Bioinform., 2015)

Direct calculation of minimal cut sets involving a specific reaction knock-out. - Luis Tobalina; Jon Pey; Francisco J. Planes (Bioinform., 2016)

rMTA: robust metabolic transformation analysis. - Luis Vitores Valcarcel; Verónica Torrano; Luis Tobalina; Arkaitz Carracedo; Francisco J. Planes (Bioinform., 2019)