gMCS: fast computation of genetic minimal cut sets in large networks. - Iñigo Apaolaza; Luis Vitores Valcarcel; Francisco J. Planes (Bioinform., 2019)

rMTA: robust metabolic transformation analysis. - Luis Vitores Valcarcel; Verónica Torrano; Luis Tobalina; Arkaitz Carracedo; Francisco J. Planes (Bioinform., 2019)

A network-based approach to integrate nutrient microenvironment in the prediction of synthetic lethality in cancer metabolism. - Iñigo Apaolaza; Edurne San José-Enériz; Luis Vitores Valcarcel; Xabier Agirre; Felipe Prósper; Francisco J. Planes (PLoS Comput. Biol., 2022)

BOSO: A novel feature selection algorithm for linear regression with high-dimensional data. - Luis Vitores Valcarcel; Edurne San José-Enériz; Xabier Cendoya; Ángel Rubio; Xabier Agirre; Felipe Prósper; Francisco J. Planes (PLoS Comput. Biol., 2022)

Review and meta-analysis of the genetic Minimal Cut Set approach for gene essentiality prediction in cancer metabolism. - Danel Olaverri-Mendizabal; Luis Vitores Valcarcel; Naroa Barrena; Carlos J. Rodríguez; Francisco J. Planes (Briefings Bioinform., 2024)