Is More Always Better? Effects of Patch Sampling in Distinguishing Chronic Lymphocytic Leukemia from Transformation to Diffuse Large B-Cell Lymphoma. - Rukhmini Bandyopadhyay; Pingjun Chen; Siba El Hussein; Frank R. Rojas; Kingsley Ebare; Ignacio I. Wistuba; Luisa M. Solis Soto; L. Jeffrey Medeiros; Jianjun Zhang; Joseph D. Khoury; Jia Wu 009 (CMMCA@MICCAI, 2022)

Cellular Architecture on Whole Slide Images Allows the Prediction of Survival in Lung Adenocarcinoma. - Pingjun Chen; Maliazurina B. Saad; Frank R. Rojas; Morteza Salehjahromi; Muhammad Aminu 002; Rukhmini Bandyopadhyay; Lingzhi Hong; Kingsley Ebare; Carmen Behrens; Don L. Gibbons; Neda Kalhor; John V. Heymach; et al. (CMMCA@MICCAI, 2022)

Immune-Guided AI for Reproducible Regions of Interest Selection in Multiplex Immunofluorescence Pathology Imaging. - Tanishq Gautam; Karina P. Gonzalez; Maria E. Salvatierra; Alejandra Serrano; Pingjun Chen; Xiaoxi Pan; Yasin Shokrollahi; Sara Ranjbar; Leticia Rodriguez; Luisa Solis-Soto; Yinyin Yuan; Simon P. Castillo (MICCAI (4), 2024)

Advancing Multiplex Immunofluorescence Imaging Cell Detection using Semi-Supervised Learning with Pseudo-Labeling. - Yasin Shokrollahi; Karina Pinao Gonzales; Maria Esther Salvatierra; Simon P. Castillo; Tanishq Gautam; Pingjun Chen; Leticia Rodriguez; Sara Ranjbar; Patient Mosaic Team; Luisa Solis-Soto; Yinyin Yuan; Xiaoxi Pan (MIDL, 2024)

Optimizing Cell Recognition in Sarcoma Multiplex Immunohistochemistry Images via Pre-Training Strategies. - Pingjun Chen; Maria E. Salvatierra; Alejandra Serrano; Karina Pinao Gonzalez; Sara Ranjbar; Yasin Shokrollahi; Tanishq Gautam; Leticia Rodriguez; Patient Mosaic Team; Xiaoxi Pan; Luisa M. Solis Soto; Yinyin Yuan (ISBI, 2025)

From Classical Machine Learning to Emerging Foundation Models: Review on Multimodal Data Integration for Cancer Research. - Amgad Muneer; Muhammad Waqas 007; Maliazurina B. Saad; Eman Showkatian; Rukhmini Bandyopadhyay; Hui Xu; Wentao Li; Joe Y. Chang; Zhongxing Liao; Cara Haymaker; Luisa Solis-Soto; Carol C. Wu; et al. (CoRR, 2025)