A Framework for Discrete Modeling of Juxtacrine Signaling Systems. - Luiz C. S. Rozante; Marco Dimas Gubitoso; Sergio R. Matioli (CIBCB, 2007)

A multi-GPU algorithm for large-scale neuronal networks. - Raphael Y. de Camargo; Luiz C. S. Rozante; Siang W. Song (Concurr. Comput. Pract. Exp., 2011)

Accelerating gene regulatory networks inference through GPU/CUDA programming. - Fabrizio F. Borelli; Raphael Y. de Camargo; David Correa Martins Jr.; Beatriz Stransky; Luiz C. S. Rozante (ICCABS, 2012)

Gene regulatory networks inference using a multi-GPU exhaustive search algorithm. - Fabrizio F. Borelli; Raphael Y. de Camargo; David Correa Martins Jr.; Luiz C. S. Rozante (BMC Bioinform., 2013)

A Multi-GPU Hitting Set Algorithm for GRNs Inference. - Danilo Carastan-Santos; Raphael Yokoingawa de Camargo; David Correa Martins; Siang Wun Song; Luiz Carlos Silva Rozante; Fabrizio Ferreira Borelli (CCGRID, 2015)

Multiple Sequence Alignment using Hybrid Parallel Computing. - Eloi Araujo; Marco Aurelio Stefanes; Valter de O. Ferlete; Luiz C. S. Rozante (BIBE, 2017)

Finding exact hitting set solutions for systems biology applications using heterogeneous GPU clusters. - Danilo Carastan-Santos; Raphael Y. de Camargo; David Correa Martins Jr.; Siang W. Song; Luiz C. S. Rozante (Future Gener. Comput. Syst., 2017)

Inferring Gene Regulatory Networks Using Hybrid Parallel Computing. - Jean C. W. K. Ma; Marco Aurelio Stefanes; Carlos H. A. Higa; Luiz C. S. Rozante (ICCSA (1), 2018)

Finding Attractors in Biological Models Based on Boolean Dynamical Systems Using Hitting Set. - Carlos Reynaldo Portocarrero Tovar; Eloi Araujo; Danilo Carastan-Santos; David Correa Martins; Luiz C. S. Rozante (BIBE, 2019)

A hybrid CPU-GPU-MIC algorithm for minimal hitting set enumeration. - Danilo Carastan-Santos; David Correa Martins Jr.; Siang W. Song; Luiz C. S. Rozante; Raphael Y. de Camargo (Concurr. Comput. Pract. Exp., 2019)

Multi-GPU Approach for Large-Scale Multiple Sequence Alignment. - Rodrigo A. de O. Siqueira; Marco Aurelio Stefanes; Luiz C. S. Rozante; David Correa Martins Jr.; Jorge Estefano Santana de Souza; Eloi Araujo (ICCSA (1), 2021)

Algorithms for Normalized Multiple Sequence Alignments. - Eloi Araujo; Luiz C. S. Rozante; Diego P. Rubert; Fábio Viduani Martinez (ISAAC, 2021)

A Method for Computing Attractor Fields in Coupled Boolean Networks. - Carlos Reynaldo Portocarrero Tovar; David Correa Martins; Luiz C. S. Rozante; Eloi Araujo (BIBE, 2022)

A Flexible Variant of the Neighbor-Joining for Building Phylogenetic Trees. - A. Chastel Lima; Eloi Araujo; Marco Aurelio Stefanes; Luiz C. S. Rozante (CSCI, 2022)

Fast Flexible Neighbor-Joining Using Multicomputing. - A. Chastel Lima; Eloi Araujo; Marco Aurelio Stefanes; Luiz C. S. Rozante (BIBE, 2023)

Extended Pairwise Sequence Alignment. - Eloi Araujo; Fábio Viduani Martinez; Luiz C. S. Rozante; Nalvo F. Almeida (ICCSA (1), 2023)

Efficient Computation of Attractor Fields in Coupled Boolean Networks. - Luiz C. S. Rozante; Carlos Reynaldo Portocarrero Tovar; David Correa Martins Jr.; Raphael Y. de Camargo; Luciana Arantes; Pierre Sens 001 (ICCSA (1), 2025)