A standardized framework for accurate, high-throughput genotyping of recombinant and non-recombinant viral sequences. - Luiz Carlos Júnior Alcântara; Sharon Cassol; Pieter Libin; Koen Deforche; Oliver G. Pybus; Marc Van Ranst; Bernardo Galvão-Castro; Anne-Mieke Vandamme; Tulio de Oliveira (Nucleic Acids Res., 2009)

RegaDB: community-driven data management and analysis for infectious diseases. - Pieter Libin; Gertjan Beheydt; Koen Deforche; Stijn Imbrechts; Fossie Ferreira; Kristel Van Laethem; Kristof Theys; Ana Patricia Carvalho; Joana Cavaco-Silva; Giuseppe Lapadula; Carlo Torti; Matthias Assel; et al. (Bioinform., 2013)

Genome Detective: an automated system for virus identification from high-throughput sequencing data. - Michael Vilsker; Yumna Moosa; Sam Nooij; Vagner Fonseca; Yoika Ghysens; Korneel Dumon; Raf Pauwels; Luiz Carlos Alcantara; Ewout Vanden Eynden; Anne-Mieke Vandamme; Koen Deforche; Tulio de Oliveira (Bioinform., 2019)

Genome Detective Coronavirus Typing Tool for rapid identification and characterization of novel coronavirus genomes. - Sara Cleemput; Wim Dumon; Vagner Fonseca; Wasim Abdool Karim; Marta Giovanetti; Luiz Carlos Alcantara; Koen Deforche; Tulio de Oliveira (Bioinform., 2020)

An immunoinformatics-based designed multi-epitope candidate vaccine (mpme-VAC/STV-1) against Mycoplasma pneumoniae. - Thaís Cristina Vilela Rodrigues; Arun Kumar Jaiswal; Marcela Rezende Lemes; Marcos Vinícius da Silva; Helioswilton Sales-Campos; Luiz Carlos Júnior Alcântara; Sthephane Fraga de Oliveira Tosta; Rodrigo Bentes Kato; Khalid J. Alzahrani; Debmalya Barh; Vasco Ariston de Carvalho Azevedo; Sandeep Tiwari; et al. (Comput. Biol. Medicine, 2022)

Genomic Characterization of Lactobacillus delbrueckii Strains with Probiotics Properties. - Luís Cláudio Lima De Jesus; Flávia Figueira Aburjaile; Thiago De Jesus Sousa; Andrei Giacchetto Felice; Siomar de Castro Soares; Luiz Carlos Júnior Alcântara; Vasco Ariston de Carvalho Azevedo (Frontiers Bioinform., 2022)