Annotating biomedical ontology terms in electronic health records using crowd-sourcing. - Andre Lamurias; Vasco Pedro; Luka A. Clarke; Francisco M. Couto (ICBO, 2015)

IICE: Web Tool for Automatic Identification of Chemical Entities and Interactions. - Andre Lamurias; Luka A. Clarke; Francisco M. Couto (ECML/PKDD (3), 2015)

Extraction of Regulatory Events using Kernel-based Classifiers and Distant Supervision. - Andre Lamurias; Miguel J. Rodrigues; Luka A. Clarke; Francisco M. Couto (BioNLP (Shared Task), 2016)

Functional coherence metrics in protein families. - Hugo P. Bastos; Lisete Sousa; Luka A. Clarke; Francisco M. Couto (J. Biomed. Semant., 2016)

ULISBOA at SemEval-2017 Task 12: Extraction and classification of temporal expressions and events. - Andre Lamurias; Diana F. Sousa; Sofia Pereira; Luka A. Clarke; Francisco M. Couto (SemEval@ACL, 2017)

BO-LSTM: classifying relations via long short-term memory networks along biomedical ontologies. - Andre Lamurias; Diana F. Sousa; Luka A. Clarke; Francisco M. Couto (BMC Bioinform., 2019)