Search for a New Description of Protein Topology and Local Structure. - Lukasz Jaroszewski; Adam Godzik (ISMB, 2000)

Clustering of highly homologous sequences to reduce the size of large protein databases. - Weizhong Li 002; Lukasz Jaroszewski; Adam Godzik (Bioinform., 2001)

Tolerating some redundancy significantly speeds up clustering of large protein databases. - Weizhong Li 002; Lukasz Jaroszewski; Adam Godzik (Bioinform., 2002)

A segment alignment approach to protein comparison. - Yuzhen Ye; Lukasz Jaroszewski; Weizhong Li 002; Adam Godzik (Bioinform., 2003)

Domain analysis of the tubulin cofactor system: a model for tubulin folding and dimerization. - Marcin Grynberg; Lukasz Jaroszewski; Adam Godzik (BMC Bioinform., 2003)

Integrated web service for improving alignment quality based on segments comparison. - Dariusz Plewczynski; Leszek Rychlewski; Yuzhen Ye; Lukasz Jaroszewski; Adam Godzik (BMC Bioinform., 2004)

FFAS03: a server for profile-profile sequence alignments. - Lukasz Jaroszewski; Leszek Rychlewski; Zhanwen Li; Weizhong Li 002; Adam Godzik (Nucleic Acids Res., 2005)

XtalPred: a web server for prediction of protein crystallizability. - Lukasz Slabinski; Lukasz Jaroszewski; Leszek Rychlewski; Ian A. Wilson; Scott A. Lesley; Adam Godzik (Bioinform., 2007)

Expansion of the Protein Repertoire in Newly Explored Environments: Human Gut Microbiome Specific Protein Families. - Kyle Ellrott; Lukasz Jaroszewski; Weizhong Li 002; John C. Wooley; Adam Godzik (PLoS Comput. Biol., 2010)

FFAS server: novel features and applications. - Lukasz Jaroszewski; Zhanwen Li; Xiao-hui Cai; Christoph Weber; Adam Godzik (Nucleic Acids Res., 2011)

Two Pfam protein families characterized by a crystal structure of protein lpg2210 from Legionella pneumophila. - Penelope Coggill; Ruth Y. Eberhardt; Robert D. Finn; Yuanyuan Chang; Lukasz Jaroszewski; Adam Godzik; Debanu Das; Qingping Xu; Herbert L. Axelrod; L. Aravind; Alexey G. Murzin; Alex Bateman (BMC Bioinform., 2013)

FFAS-3D: improving fold recognition by including optimized structural features and template re-ranking. - Dong Xu 008; Lukasz Jaroszewski; Zhanwen Li; Adam Godzik (Bioinform., 2014)

PubServer: literature searches by homology. - Lukasz Jaroszewski; Laszlo Koska; Mayya Sedova; Adam Godzik (Nucleic Acids Res., 2014)

AIDA: ab initio domain assembly server. - Dong Xu 008; Lukasz Jaroszewski; Zhanwen Li; Adam Godzik (Nucleic Acids Res., 2014)

AIDA: ab initio domain assembly for automated multi-domain protein structure prediction and domain-domain interaction prediction. - Dong Xu 008; Lukasz Jaroszewski; Zhanwen Li; Adam Godzik (Bioinform., 2015)

PROPER: Performance visualization for optimizing and comparing ranking classifiers in MATLAB. - Samad Jahandideh; Fatemeh Sharifi; Lukasz Jaroszewski; Adam Godzik (Source Code Biol. Medicine, 2015)

Revealing aperiodic aspects of solenoid proteins from sequence information. - Thomas Hrabe; Lukasz Jaroszewski; Adam Godzik (Bioinform., 2016)

Protael: protein data visualization library for the web. - Mayya Sedova; Lukasz Jaroszewski; Adam Godzik (Bioinform., 2016)

PDBFlex: exploring flexibility in protein structures. - Thomas Hrabe; Zhanwen Li; Mayya Sedova; Piotr Rotkiewicz; Lukasz Jaroszewski; Adam Godzik (Nucleic Acids Res., 2016)

Cancer3D 2.0: interactive analysis of 3D patterns of cancer mutations in cancer subsets. - Mayya Sedova; Mallika Iyer; Zhanwen Li; Lukasz Jaroszewski; Kai W. Post; Thomas Hrabe; Eduard Porta-Pardo; Adam Godzik (Nucleic Acids Res., 2019)

Coronavirus3D: 3D structural visualization of COVID-19 genomic divergence. - Mayya Sedova; Lukasz Jaroszewski; Arghavan Alisoltani; Adam Godzik (Bioinform., 2020)

FATCAT 2.0: towards a better understanding of the structural diversity of proteins. - Zhanwen Li; Lukasz Jaroszewski; Mallika Iyer; Mayya Sedova; Adam Godzik (Nucleic Acids Res., 2020)

The interplay of SARS-CoV-2 evolution and constraints imposed by the structure and functionality of its proteins. - Lukasz Jaroszewski; Mallika Iyer; Arghavan Alisoltani; Mayya Sedova; Adam Godzik (PLoS Comput. Biol., 2021)