An R package suite for microarray meta-analysis in quality control, differentially expressed gene analysis and pathway enrichment detection. - Xingbin Wang; Dongwan D. Kang; Kui Shen; Chi Song; Shuya Lu; Lun-Ching Chang; Serena G. Liao; Zhiguang Huo; Shaowu Tang; Ying Ding; Naftali Kaminski; Etienne Sibille; et al. (Bioinform., 2012)

Meta-analysis methods for combining multiple expression profiles: comparisons, statistical characterization and an application guideline. - Lun-Ching Chang; Hui-Min Lin; Etienne Sibille; George C. Tseng (BMC Bioinform., 2013)

A computational method for genotype calling in family-based sequencing data. - Lun-Ching Chang; Bingshan Li; Zhou Fang; Scott Vrieze; Matthew McGue; William G. Iacono; George C. Tseng; Wei Chen 074 (BMC Bioinform., 2016)

MetaOmics: analysis pipeline and browser-based software suite for transcriptomic meta-analysis. - Tianzhou Ma; Zhiguang Huo; Anche Kuo; Li Zhu; Zhou Fang; Xiangrui Zeng; Chien-Wei Lin; Silvia Liu; Lin Wang; Peng Liu; Tanbin Rahman; Lun-Ching Chang; et al. (Bioinform., 2019)

HCMMCNVs: hierarchical clustering mixture model of copy number variants detection using whole exome sequencing technology. - Chi Song; Shih-Chi Su; Zhiguang Huo; Suleyman Vural; James E. Galvin; Lun-Ching Chang (Bioinform., 2021)

wiSDOM: a visual and statistical analytics for interrogating microbiome. - Shih-Chi Su; James E. Galvin; Shun-Fa Yang; Wen-Hung Chung; Lun-Ching Chang (Bioinform., 2021)