A Crisis-Responsive Framework for Medical Device Development Applied to the COVID-19 Pandemic. - Marc-Joseph Antonini; Deborah Plana; Shriya S. Srinivasan; Lyla Atta; Aditya Achanta; Helen L. Yang; Avilash K. Cramer; Jacob Freake; Michael S. Sinha; Sherry H. Yu; Nicole R. LeBoeuf; Ben Linville-Engler; et al. (Frontiers Digit. Health, 2021)

VeloViz: RNA velocity-informed embeddings for visualizing cellular trajectories. - Lyla Atta; Arpan Sahoo; Jean Fan (Bioinform., 2022)

SEraster: a rasterization preprocessing framework for scalable spatial omics data analysis. - Gohta Aihara; Kalen Clifton; Mayling Chen; Zhuoyan Li; Lyla Atta; Brendan F. Miller; Rahul Satija; John W. Hickey; Jean Fan (Bioinform., 2024)