Enabling Systems Biology: A Scientific Problem-Solving Environment. - Mudita Singhal; Eric G. Stephan; Kyle R. Klicker; Lynn Trease; George Chin Jr.; Deborah K. Gracio; Deborah A. Payne (International Conference on Computational Science, 2004)

Computational Cell Environment: A Problem Solving Environment for Integrating Diverse Biological Data. - Kyle R. Klicker; Mudita Singhal; Eric G. Stephan; Lynn Trease; Deborah K. Gracio (METMBS, 2004)

Bioinformatics Approach for Exploring MS/MS Proteomics Data. - Mudita Singhal; Kyle R. Klicker; George Chin Jr.; Lynn Trease; Eric G. Stephan; Deborah K. Gracio (HICSS, 2005)

Unstructured data analysis of streaming video using parallel, high-throughput algorithms. - Harold Trease; Tim Carlson; Ryan W. Mooney; Robert M. Farber; Lynn Trease (SIP, 2007)