Identifying Differentially Expressed Genes in cDNA Microarray Experiments. - Keith A. Baggerly; Kevin R. Coombes; Kenneth R. Hess; David N. Stivers; Lynne V. Abruzzo; Wei Zhang 011 (J. Comput. Biol., 2001)

Identifying and Quantifying Sources of Variation in Microarray Data Using High-Density cDNA Membrane Arrays. - Kevin R. Coombes; W. Edward Highsmith; Tammy A. Krogmann; Keith A. Baggerly; David N. Stivers; Lynne V. Abruzzo (J. Comput. Biol., 2002)

Differences in gene expression between B-cell chronic lymphocytic leukemia and normal B cells: a meta-analysis of three microarray studies. - Jing Wang 006; Kevin R. Coombes; W. Edward Highsmith; Michael J. Keating; Lynne V. Abruzzo (Bioinform., 2004)

CytoGPS: a web-enabled karyotype analysis tool for cytogenetics. - Zachary B. Abrams; Lin Zhang; Lynne V. Abruzzo; Nyla A. Heerema; Suli Li; Tom Dillon; Ricky Rodriguez; Kevin R. Coombes; Philip R. O. Payne (Bioinform., 2019)

Inferring clonal heterogeneity in cancer using SNP arrays and whole genome sequencing. - Mark R. Zucker; Lynne V. Abruzzo; Carmen D. Herling; Lynn L. Barron; Michael J. Keating; Zachary B. Abrams; Nyla A. Heerema; Kevin R. Coombes (Bioinform., 2019)

CytoGPS: A Web-Enabled Karyotype Analysis Tool for Cytogeneticists and Biomedical Data Scientists. - Zachary B. Abrams; Lin Zhang; Ricky Rodriguez; Lynne V. Abruzzo; Kevin R. Coombes; Philip R. P. Payne (AMIA, 2020)

Unsupervised machine learning and prognostic factors of survival in chronic lymphocytic leukemia. - Caitlin E. Coombes; Zachary B. Abrams; Suli Li; Lynne V. Abruzzo; Kevin R. Coombes (J. Am. Medical Informatics Assoc., 2020)

RCytoGPS: an R package for reading and visualizing cytogenetics data. - Zachary B. Abrams; Dwayne G. Tally; Lynne V. Abruzzo; Kevin R. Coombes (Bioinform., 2021)

Pattern recognition in lymphoid malignancies using CytoGPS and Mercator. - Zachary B. Abrams; Dwayne G. Tally; Lin Zhang; Caitlin E. Coombes; Philip R. O. Payne; Lynne V. Abruzzo; Kevin R. Coombes (BMC Bioinform., 2021)