Structure-based combinatorial library design: Discovery of non-peptidic inhibitors of caspases 3 and 8. - Martha S. Head; M. Dominic Ryan; Dennis Lee; Yanhong Feng; Cheryl A. Janson; Nestor O. Concha; Paul M. Keller; Walter E. deWolf Jr. (J. Comput. Aided Mol. Des., 2001)

Transferable atom equivalent multicentered multipole expansion method. - Christopher E. Whitehead; Curt M. Breneman; Nagamani Sukumar; M. Dominic Ryan (J. Comput. Chem., 2003)

Rank Order Entropy: Why One Metric Is Not Enough. - Margaret R. McLellan; M. Dominic Ryan; Curt M. Breneman (J. Chem. Inf. Model., 2011)

In-silico guided discovery of novel CCR9 antagonists. - Xin Zhang 027; Jason B. Cross; Jan Romero; Alexander Heifetz; Eric Humphries; Katie Hall; Yuchuan Wu; Sabrina Stucka; Jing Zhang; Haoqun Chandonnet; Blaise Lippa; M. Dominic Ryan; et al. (J. Comput. Aided Mol. Des., 2018)